Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20cristatus_20[genbank_20GCA_5F001717485.1_202016-08-31] 68 sequences; 28,454,192 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq66 176 4e-39 seq1 109 5e-19 >seq66 Length=1272724 Score = 176 bits (194), Expect = 4e-39 Identities = 346/505 (69%), Gaps = 25/505 (5%) Strand=Plus/Minus Query 52344 AAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCG---CCACGCTGGCCGAGCGC 52400 |||||| | ||||| || ||||||||| || |||| | |||| | || ||| Sbjct 1041050 AAGGCTGATTGGGCTATCAAGTGGATCCAG---GACAAGGAGTCCACCTTTGCTTCGCGT 1040994 Query 52401 ATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTT 52460 | |||||||||||| || ||||| | || || || ||| || ||| | ||||| Sbjct 1040993 CTCGTGGCCTTCGCCGCCGTTGAGGGTATCTTCTTCTCTGGCTCGTTCGCCTCTATCTTC 1040934 Query 52461 TACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGC 52520 | | || | | ||| | ||||| || || || ||| ||||||| |||| || || Sbjct 1040933 TGGCTGAAGAAGCGTGGCCTGATGCCTGGTCTTACCTTCTCCAACGAGCTGATCTCTCGT 1040874 Query 52521 GACGAAGGACTGCACACGGACTTTGCGTGC---CTCTACT---ACAAGACGCGCGTGACC 52574 ||||| || || ||||| |||||||| ||| || | || || || | | || Sbjct 1040873 GACGAGGGTCTCCACACCGACTTTGCTTGCTTGCTGTTCTCTCACTTGAACCACCGCCCC 1040814 Query 52575 GAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAG 52634 || || | ||| || || ||| ||| ||||| || ||||| || || Sbjct 1040813 GACAAGCAGA--TCGTCCAGGA-------CATCATCACTGAGGCCGTCGCTATTGAGCAG 1040763 Query 52635 GAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGC 52694 ||||| || || | ||| || || |||| ||||| ||||||||||| || |||| | Sbjct 1040762 GAGTTCTTGACTGACGCTCTCCCTGTCGCCCTGCTCGGCATGAACGCCAAGCTCATGACC 1040703 Query 52695 GAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGT-GCAGCTCGGGCAGCCA-AAGTACT 52752 ||||||||||||| || || || ||||| |||| ||| | ||||| ||| ||||||| Sbjct 1040702 CAGTACATCGAGTTCGTTGCCGACCGTCTCCTGGTCGCA--TTGGGCAACCAGAAGTACT 1040645 Query 52753 TCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACT 52812 | |||| ||| || || || || ||| | ||||| || || | ||||||||||||| Sbjct 1040644 ACCACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGCTGGCAAGACCAACT 1040585 Query 52813 TTTTCGAGAAGCGAGTCGGCGAGTA 52837 | ||||||||||| || || || || Sbjct 1040584 TCTTCGAGAAGCGTGTTGGTGACTA 1040560 >seq1 Length=5851576 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| |||||| || || || | | | |||||||| ||||||||||||||| | Sbjct 2107852 CCACCACGCAGACGCAACACCAAGTGCAAGGTGGACTCCTTCTGAATGTTGTAGTCGGAC 2107793 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| |||||||| || || |||| |||| | |||||||||||| ||||| Sbjct 2107792 AGCGTACGACCATCCTCGAGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCAGGAGGA 2107733 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || || || || ||| || || | | || | ||||||| | ||||| ||| Sbjct 2107732 ATGCCCTCCTTATCCTGGATCTTCGACTTGACATTATCGATGGTGTCGCTGGACTCAACC 2107673 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 |||| || | || || ||||| || || || || Sbjct 2107672 TCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGAC 2107638 Score = 95.1 bits (104), Expect = 1e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||||||| || || ||||| || || ||||| | ||| Sbjct 4105634 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 4105693 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTT 138544 | || |||||||||||||| || ||||| || || || ||| || || | | | Sbjct 4105694 TCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTATCCTGGATCTTGGCCTTGACGTTGT 4105753 Query 138545 CCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAA 138604 | | ||||||| ||||||| || |||| || | || ||||| ||||| || || || | Sbjct 4105754 CGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 4105813 Query 138605 AA 138606 || Sbjct 4105814 AA 4105815 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || || || || ||||||||||| || ||||| ||||| || || || |||| Sbjct 2108047 GATTCTTTCTGGATGTTGTAGTCCGACAGGGTACGACCATCCTCAAGCTGCTTTCCGGCG 2107988 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 | || |||||||||||||| ||||| || ||||| || || ||| ||| || | Sbjct 2107987 AAAATGAGACGCTGTTGGTCGGGAGGGATCCCTTCCTTATCTTGGATCTTTGACTTGACG 2107928 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||| | ||||||||| || | || | || || || || || || || Sbjct 2107927 TTGTCGATCGTGTCCGACGACTCCACTTCCAGAGTGATAGTCTTTCCGGTTAGGGTCTTA 2107868 Query 138601 ACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 2107867 ACGAAAATCTGCAT 2107854 Score = 82.4 bits (90), Expect = 8e-11 Identities = 128/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | ||| | ||| | || | | | |||||||| || |||||||||||| Sbjct 2107560 GCCACCACGGAGACGGAGAACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGA 2107501 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| ||| || || | || ||||| | |||| ||||||||||||||||| || Sbjct 2107500 GAGAGTGCGCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGTTGGTCCGGCGG 2107441 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| || || | | || | ||||||| ||||||| || Sbjct 2107440 GATTCCCTCCTTGTCTTGGATCTTGCTCTTGACGTTGTCGATGGTGTCGCTCGACTCGAC 2107381 Query 138567 CTC 138569 ||| Sbjct 2107380 CTC 2107378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261978176960