Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20cristatus_20[genbank_20GCA_5F001717485.1_202016-08-31]
68 sequences; 28,454,192 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq1 89.7 3e-13
>seq1
Length=5851576
Score = 89.7 bits (98), Expect = 3e-13
Identities = 144/205 (70%), Gaps = 8/205 (4%)
Strand=Plus/Minus
Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828
||| |||||||| | ||| || ||||||||||| ||||| || || | || ||||
Sbjct 2107838 CAACACCAAGTGCAAGGTGGACTCCTTCTGAATGTTGTAGTCGGACAGCGTACGACCATC 2107779
Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888
|| ||||| || ||||| || || | || || ||||| | || | |||||||| ||
Sbjct 2107778 CTCGAGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCAGGAGGAATGCCCTCCTTATC 2107719
Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTA 34944
|||||| ||||| || ||||||| || | || |||||| |||| ||| |
Sbjct 2107718 CTGGATCTTCGACTTGAC--AT--TATCGATGGTGTCGCTGGACTCAACCTCGAGGGTGA 2107663
Query 34945 TGGTTTTTCCCGTGAGAGTCTTCAC 34969
|||| || || || || ||||| ||
Sbjct 2107662 TGGTCTTGCCAGTAAGGGTCTTGAC 2107638
Score = 82.4 bits (90), Expect = 5e-11
Identities = 148/214 (69%), Gaps = 8/214 (4%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||| | ||||| || ||||| ||||| ||||| || || | || |||| |||
Sbjct 2108290 ACCAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGCCCATCTTCC 2108231
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
| ||| || || || || || || || || ||||| |||| | ||||| ||||| |
Sbjct 2108230 AACTGCTTACCAGCGAAGATGAGACGCTGTTGGTCCGGCGGGATACCCTCTTTGTCCTGA 2108171
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCAC-CGGCC---TCAACATCGACGGTTATGGT 34948
||||| |||||| | |||||| ||| || || || | || || ||
Sbjct 2108170 ATCTTGCTCTTGACGT----TGTCGATTGTGTCGGAACTTTCGACTTCCAATGTGATTGT 2108115
Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
||||| ||||| ||||| || ||||||||||||
Sbjct 2108114 CTTTCCAGTGAGGGTCTTGACGAAGATCTGCATA 2108081
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324633330959904
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |