Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20cristatus_20[genbank_20GCA_5F001717485.1_202016-08-31] 68 sequences; 28,454,192 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 1e-12 seq45 84.2 2e-11 >seq1 Length=5851576 Score = 87.8 bits (96), Expect = 1e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 ||||| | || || | |||| || ||||||||||| || || || ||||| || || Sbjct 2108308 CCGCCACGGAGACGAAGGACCAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 2108249 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| | || | || |||||||||||||| || || || || |||||||| |||| || Sbjct 2108248 AGAGTGCGCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGTTGGTCCGGCGGG 2108189 Query 48660 ACGCCCTCCTTGTCGCTAATCTT 48682 | ||||| ||||| |||||| Sbjct 2108188 ATACCCTCTTTGTCCTGAATCTT 2108166 Score = 82.4 bits (90), Expect = 6e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||||||||| || | ||| ||| || ||||| ||||| || || || | ||| Sbjct 2107843 AGACGCAACACCAAGTGCAAGGTGGACTCCTTCTGAATGTTGTAGTCGGACAGCGTACGA 2107784 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | |||||| ||||| || |||| |||||||| || | |||| ||||||| Sbjct 2107783 CCATCCTCGAGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCAGGAGGAATGCCCTCC 2107724 Query 48669 TTGTC 48673 || || Sbjct 2107723 TTATC 2107719 >seq45 Length=2308221 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| ||| | || || || ||| || || || ||||| || || ||| | || Sbjct 1966206 AGGCGCAGCACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGG 1966147 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| |||| ||||||||| || || ||||| |||||||| |||| ||| | |||||| Sbjct 1966146 CCGTCCTCCAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGGGGGATTCCCTCC 1966087 Query 48669 TTGTCGCTAATCTT 48682 ||||| | ||||| Sbjct 1966086 TTGTCTATTATCTT 1966073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937284297964