Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20cristatus_20[genbank_20GCA_5F001717485.1_202016-08-31] 68 sequences; 28,454,192 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq12 138 3e-27 seq45 136 1e-26 seq66 116 1e-20 seq23 95.1 4e-14 >seq12 Length=3061394 Score = 138 bits (152), Expect = 3e-27 Identities = 387/591 (65%), Gaps = 5/591 (1%) Strand=Plus/Plus Query 155910 ACACGCTCCATAAATACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGAC 155969 ||||||| ||| || | || | ||| | || ||||| ||||| | || | |||| Sbjct 2886469 ACACGCTTCATGAACAAGTCGGGAGTCCACAAGGCGTAGAACAGGTCACGAGC-TCTGAC 2886527 Query 155970 -TCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGG 156028 ||||| | || || ||||| || || || ||||| || | || | || || Sbjct 2886528 CTCCTCCTTACCATGGTTCTTGCGCAGATCCAAGAACTCGAAGACGTCCGAGTGCCAGGG 2886587 Query 156029 CTCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGC 156085 ||| || || || |||||| |||| | |||| || ||||| || || || | ||| Sbjct 2886588 CTCAAGGTAGATGGCAAAAGCACCAGGACGCTTGTTGCCTCCCTGGTCGACGTATCTAGC 2886647 Query 156086 AGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCG 156145 ||| || ||| | || | |||||||| | | ||| ||||| || || |||||||||| Sbjct 2886648 AGTGTTGTTGTACACGCGGAGCATAGGGACGAGACCGTTGGAGGTACCGTTGGTTCCGCC 2886707 Query 156146 AATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTT 156205 ||| | || || | || || | || | | || ||||||||||| | ||| Sbjct 2886708 AATGTAGGAGCCTGTCGAACGGATGCGGTGGACGTTGAGACCAATACCACCGGCGGTTTT 2886767 Query 156206 AGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT 156265 || || ||| || ||| | || | | ||||| || ||| || | | ||| Sbjct 2886768 GGAGATCATAGCACAGGTCTTCAGGGTGTCATAGATACCCTCGATACTGTCTGCCTTCAT 2886827 Query 156266 TGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGG 156325 | || ||||||| || || || | || || ||||||||||| || || || Sbjct 2886828 GTCGACAAGGAAGCACGAGGCCAACTGGGGCTGCGGGGTACCAGCGTTGAACAGGGTGGG 2886887 Query 156326 TGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAG 156385 | |||||| | || || || | ||||| | | ||||||||| | | |||||| Sbjct 2886888 GGATGCATGGGTGAAGTATTTCTGGGACATCAAGTGGTATGTCTCAATTGCCCTCTCAAT 2886947 Query 156386 ATTAGACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAAT 156445 | | ||||| || | | || |||| |||| || |||||||||||||| ||| Sbjct 2886948 GTCACTACCGTGGATTCCAACAGCAACCCGCATCAGCAGGTGCTGAGGACGCTCAGCAAC 2887007 Query 156446 CACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAA 156496 | |||||| |||||||| ||||||| || || ||||| || || ||||| Sbjct 2887008 CTTTCCATCGATTCGCAGCAGGTATGACCGCTCAAGAGTCTTGAAACCGAA 2887058 >seq45 Length=2308221 Score = 136 bits (150), Expect = 1e-26 Identities = 199/276 (72%), Gaps = 8/276 (3%) Strand=Plus/Plus Query 302595 ACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACC 302654 |||||| || ||||||||| || || || ||||| |||||||| ||||| ||||||| Sbjct 500773 ACGCTGGATGTAACCAGTTTCAGCAGTCTTGACAGCAGTATCAATAAGACCCTCACGACC 500832 Query 302655 ACCCATAGCATGGAAGAATAGCTC--TTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCA 302712 | |||| || |||||||| | || || ||| |||| | ||| | | || ||||| Sbjct 500833 AGCCATGGCGTGGAAGAAGAATTCGGTTGGAGTCA-AGCCACGCAAGTACG-AGTTCTCA 500890 Query 302713 ACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTC 302772 || || ||||| | ||| ||||| | |||| |||||| ||||| |||| |||| | Sbjct 500891 ACAAACCCACGGGACTCTGGCGAGTAGTCGTCCTTGGTGAAGTGCGGCAATGTCCGATAT 500950 Query 302773 TCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATC 302832 | | ||| | || ||||||||||| |||||| ||| ||||||| | | | ||||| Sbjct 500951 TTGAAACCGAAGGGAATACGCTTTCCTTCAACGGACTGTTGTCCCACGACAGCAGTCATC 501010 Query 302833 TGCGAAATATTTAAATCACTG--CCCTTGGAGCCAG 302866 || || || || |||| | |||||||| |||| Sbjct 501011 TGAGAGATGTT--AATCGTGGAACCCTTGGATCCAG 501044 >seq66 Length=1272724 Score = 116 bits (128), Expect = 1e-20 Identities = 145/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 133458 CTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTG 133517 |||| |||||||| || ||||||||||||||| | | |||||| | |||||||| | Sbjct 1041046 CTGATTGGGCTATCAAGTGGATCCAGGACAAGGAGTCCACCTTTGCTTCGCGTCTCGTGG 1040987 Query 133518 CTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTA 133577 | || || | || ||||| || || ||| ||| ||||| |||||| || ||||| | Sbjct 1040986 CCTTCGCCGCCGTTGAGGGTATCTTCTTCTCTGGCTCGTTCGCCTCTATCTTCTGGCTGA 1040927 Query 133578 AAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGG 133637 | |||||||| | | ||||| || || || ||||| || || || | ||||||| Sbjct 1040926 AGAAGCGTGGCCTGATGCCTGGTCTTACCTTCTCCAACGAGCTGATCTCTCGTGACGAGG 1040867 Query 133638 CACTTCACACCGAATTTGC 133656 || |||||||| ||||| Sbjct 1040866 GTCTCCACACCGACTTTGC 1040848 >seq23 Length=3045849 Score = 95.1 bits (104), Expect = 4e-14 Identities = 88/112 (79%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 354023 CACCAAGCGAGTCACGGTCGAGGAAATTAGTAGGTTCGTCAAGGATAAGAACGTGCGGCT 354082 ||||||||||||||||||| | ||| |||||||| ||||| || | || | ||| || | Sbjct 141964 CACCAAGCGAGTCACGGTCCAAGAAGTTAGTAGGCTCGTCCAGAACCAGCAAGTGAGGGT 142023 Query 354083 CCATCCACATTGCTGCAGCCAGAACTACCTTAACCTTCTGTCCGCCTGATAG 354134 ||||||| || | ||||| || ||||| ||||||||||| || ||||| Sbjct 142024 TGTTCCACATGGCACCGGCCAGGACGACCTTGACCTTCTGTCCACCGGATAG 142075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816317678916