Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20cristatus_20[genbank_20GCA_5F001717485.1_202016-08-31] 68 sequences; 28,454,192 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq12 140 4e-27 seq1 123 3e-22 seq66 122 1e-21 >seq12 Length=3061394 Score = 140 bits (154), Expect = 4e-27 Identities = 100/115 (87%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 ||||||||||||||||| |||||| | |||| || | || |||||| | || |||||| Sbjct 2623707 GCCGCCAACTACCTCGATATCAAGGCATTGCTGGACGTGGGCTGCAAGACCGTCGCCAAC 2623766 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||||||||||||||||||||||||||||||||| |||||| || ||| Sbjct 2623767 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTCAACATCCAGAACG 2623821 Score = 118 bits (130), Expect = 1e-20 Identities = 181/258 (70%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||||||||| | || |||| ||| | ||||||||||| || ||||| |||||||| Sbjct 2886630 CTGGTCGACGTATCTAGCAGTGTTGTTGTACACGCGGAGCATAGGGACGAGACCGTTGGA 2886689 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 |||||||| || | | ||||| ||| | | || | ||| || | || Sbjct 2886690 GGTACCGTTGGTTCCGCCAATGTAGGAGCCTGTCGAACGGATGCGGTGGACGTTGAGACC 2886749 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 || || ||||| | |||||||| | || || || || ||||| ||||| ||||| Sbjct 2886750 AATACCACCGGCGGTTTTGGAGATCATAGCACAGGTCTTCAGGGTGTCATAGATACCCTC 2886809 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 ||| ||| ||||||||||| || || |||||||| | || || |||| || || Sbjct 2886810 GATACTGTCTGCCTTCATGTCGACAAGGAAGCACGAGGCCAACTGGGGCTGCGGGGTACC 2886869 Query 1630305 GGCGTTGAAGAGCGTGGG 1630322 |||||||| || ||||| Sbjct 2886870 AGCGTTGAACAGGGTGGG 2886887 >seq1 Length=5851576 Score = 123 bits (136), Expect = 3e-22 Identities = 110/138 (80%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||||||||| ||||| || || ||||| |||||||| || ||||| |||||| Sbjct 2969666 GACAGCATCGGTGGCACAGTCACCTGCGTCATCCGCAACGTCCCCATCGGCCTTGGCGAG 2969607 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| |||||| |||||||| ||||| ||||||||||| || ||||| || ||| Sbjct 2969606 CCCTGCTTCGACAAGCTCGAGGCCAAGCTCGGACACGCCATGCTCTCCATCCCCGCGACC 2969547 Query 19167 AAGGGATTCGAGATTGGC 19184 ||||| ||||| || ||| Sbjct 2969546 AAGGGCTTCGAAATCGGC 2969529 Score = 96.9 bits (106), Expect = 4e-14 Identities = 122/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 18120 CGTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGCCACTGGCCGAGGCCGACATCCA 18179 ||||||||||||| |||||||| || || |||||| ||| | || | ||||||||| Sbjct 2970270 CGTCGGCTGCATCGTCGACGGCTGCCCCCCAGGCATGCAACTCACAGAAGACGACATCCA 2970211 Query 18180 GCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCACTTTCCACGCCGCGCAACGAGCC 18239 ||| || || || || || || |||||| |||| || | || ||||| ||||| Sbjct 2970210 GCCCCAAATGACCCGCCGACGCCCCGGCCAGAGCGCGCTGACGACCCCGCGAAACGAAAA 2970151 Query 18240 CGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCTCACGCTCGG 18287 || |||||| ||||||||||| ||||| ||| |||| || || Sbjct 2970150 GGACCGCGTCGAGATCCAGTCGGGAACGGAATTCGGAGTCACCCTGGG 2970103 >seq66 Length=1272724 Score = 122 bits (134), Expect = 1e-21 Identities = 180/252 (71%), Gaps = 5/252 (2%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| |||||||||||||| | || ||||| Sbjct 1040551 GCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATG 1040610 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGA--GCGACG 868808 |||||| | ||| ||||||| | | ||||| ||| | | || | |||| Sbjct 1040611 TTCTCCATGAAGTCGAAGGGGTTGGTGGCGTGGTAGTACTTCTGGTTGCCCAATGCGA-- 1040668 Query 868809 CGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGA 868868 | || || |||||||| || ||||||||||||||| |||||| |||||||||||||| Sbjct 1040669 CCAGGAGACGGTCGGCAACGAACTCGATGTACTGGGTCATGAGCTTGGCGTTCATGCCGA 1040728 Query 868869 TGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGA 868928 || || || || || | || ||| ||||| | ||| || |||||||||| || Sbjct 1040729 GCAGGGCGACAGGGAGAGCGTCAGTCAAGAACTCCTGCTCAATAGCGACGGCCTCAGTGA 1040788 Query 868929 TGATCTGCCTGG 868940 |||| | ||||| Sbjct 1040789 TGATGT-CCTGG 1040799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107133619601556