Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20cristatus_20[genbank_20GCA_5F001717485.1_202016-08-31]
68 sequences; 28,454,192 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq12 140 4e-27
seq1 123 3e-22
seq66 122 1e-21
>seq12
Length=3061394
Score = 140 bits (154), Expect = 4e-27
Identities = 100/115 (87%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
||||||||||||||||| |||||| | |||| || | || |||||| | || ||||||
Sbjct 2623707 GCCGCCAACTACCTCGATATCAAGGCATTGCTGGACGTGGGCTGCAAGACCGTCGCCAAC 2623766
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300
||||||||||||||||||||||||||||||||||||||||| |||||| || |||
Sbjct 2623767 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTCAACATCCAGAACG 2623821
Score = 118 bits (130), Expect = 1e-20
Identities = 181/258 (70%), Gaps = 0/258 (0%)
Strand=Plus/Plus
Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124
|||||||||||| | || |||| ||| | ||||||||||| || ||||| ||||||||
Sbjct 2886630 CTGGTCGACGTATCTAGCAGTGTTGTTGTACACGCGGAGCATAGGGACGAGACCGTTGGA 2886689
Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184
|||||||| || | | ||||| ||| | | || | ||| || | ||
Sbjct 2886690 GGTACCGTTGGTTCCGCCAATGTAGGAGCCTGTCGAACGGATGCGGTGGACGTTGAGACC 2886749
Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244
|| || ||||| | |||||||| | || || || || ||||| ||||| |||||
Sbjct 2886750 AATACCACCGGCGGTTTTGGAGATCATAGCACAGGTCTTCAGGGTGTCATAGATACCCTC 2886809
Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304
||| ||| ||||||||||| || || |||||||| | || || |||| || ||
Sbjct 2886810 GATACTGTCTGCCTTCATGTCGACAAGGAAGCACGAGGCCAACTGGGGCTGCGGGGTACC 2886869
Query 1630305 GGCGTTGAAGAGCGTGGG 1630322
|||||||| || |||||
Sbjct 2886870 AGCGTTGAACAGGGTGGG 2886887
>seq1
Length=5851576
Score = 123 bits (136), Expect = 3e-22
Identities = 110/138 (80%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106
||||||||||| ||||| || || ||||| |||||||| || ||||| ||||||
Sbjct 2969666 GACAGCATCGGTGGCACAGTCACCTGCGTCATCCGCAACGTCCCCATCGGCCTTGGCGAG 2969607
Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166
|| ||||| |||||| |||||||| ||||| ||||||||||| || ||||| || |||
Sbjct 2969606 CCCTGCTTCGACAAGCTCGAGGCCAAGCTCGGACACGCCATGCTCTCCATCCCCGCGACC 2969547
Query 19167 AAGGGATTCGAGATTGGC 19184
||||| ||||| || |||
Sbjct 2969546 AAGGGCTTCGAAATCGGC 2969529
Score = 96.9 bits (106), Expect = 4e-14
Identities = 122/168 (73%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 18120 CGTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGCCACTGGCCGAGGCCGACATCCA 18179
||||||||||||| |||||||| || || |||||| ||| | || | |||||||||
Sbjct 2970270 CGTCGGCTGCATCGTCGACGGCTGCCCCCCAGGCATGCAACTCACAGAAGACGACATCCA 2970211
Query 18180 GCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCACTTTCCACGCCGCGCAACGAGCC 18239
||| || || || || || || |||||| |||| || | || ||||| |||||
Sbjct 2970210 GCCCCAAATGACCCGCCGACGCCCCGGCCAGAGCGCGCTGACGACCCCGCGAAACGAAAA 2970151
Query 18240 CGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCTCACGCTCGG 18287
|| |||||| ||||||||||| ||||| ||| |||| || ||
Sbjct 2970150 GGACCGCGTCGAGATCCAGTCGGGAACGGAATTCGGAGTCACCCTGGG 2970103
>seq66
Length=1272724
Score = 122 bits (134), Expect = 1e-21
Identities = 180/252 (71%), Gaps = 5/252 (2%)
Strand=Plus/Plus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| || || || ||| |||||| |||||||||||||| | || |||||
Sbjct 1040551 GCCTTCTGGTAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATG 1040610
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGA--GCGACG 868808
|||||| | ||| ||||||| | | ||||| ||| | | || | ||||
Sbjct 1040611 TTCTCCATGAAGTCGAAGGGGTTGGTGGCGTGGTAGTACTTCTGGTTGCCCAATGCGA-- 1040668
Query 868809 CGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGA 868868
| || || |||||||| || ||||||||||||||| |||||| ||||||||||||||
Sbjct 1040669 CCAGGAGACGGTCGGCAACGAACTCGATGTACTGGGTCATGAGCTTGGCGTTCATGCCGA 1040728
Query 868869 TGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGA 868928
|| || || || || | || ||| ||||| | ||| || |||||||||| ||
Sbjct 1040729 GCAGGGCGACAGGGAGAGCGTCAGTCAAGAACTCCTGCTCAATAGCGACGGCCTCAGTGA 1040788
Query 868929 TGATCTGCCTGG 868940
|||| | |||||
Sbjct 1040789 TGATGT-CCTGG 1040799
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107133619601556
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |