Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20cristatus_20[genbank_20GCA_5F001717485.1_202016-08-31]
68 sequences; 28,454,192 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq1 98.7 9e-16
seq66 84.2 2e-11
>seq1
Length=5851576
Score = 98.7 bits (108), Expect = 9e-16
Identities = 99/129 (77%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
||||| ||||| ||||| || | | | ||||| || ||||||||||||||| || ||
Sbjct 2107847 ACGCAGACGCAACACCAAGTGCAAGGTGGACTCCTTCTGAATGTTGTAGTCGGACAGCGT 2107788
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
||| ||| |||||||| || |||| |||| | ||||||||| || ||||| |||||
Sbjct 2107787 ACGACCATCCTCGAGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCAGGAGGAATGCC 2107728
Query 132022 TTCTTTATC 132030
|| |||||
Sbjct 2107727 CTCCTTATC 2107719
Score = 89.7 bits (98), Expect = 5e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|| ||||| || ||||||||||| || |||||| ||| || ||||| || ||||
Sbjct 2108047 GATTCTTTCTGGATGTTGTAGTCCGACAGGGTACGACCATCCTCAAGCTGCTTTCCGGCG 2107988
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
| || ||||||||||| || ||||| || ||||| ||||| || ||| || |
Sbjct 2107987 AAAATGAGACGCTGTTGGTCGGGAGGGATCCCTTCCTTATCTTGGATCTTTGACTTGACG 2107928
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | || || | || ||||||||| | || | || || || || || || ||
Sbjct 2107927 TTGTCGATCGTGTCCGACGACTCCACTTCCAGAGTGATAGTCTTTCCGGTTAGGGTCTTA 2107868
Query 132110 ATGAAAATCTGCAT 132123
| ||||||||||||
Sbjct 2107867 ACGAAAATCTGCAT 2107854
>seq66
Length=1272724
Score = 84.2 bits (92), Expect = 2e-11
Identities = 145/207 (70%), Gaps = 4/207 (2%)
Strand=Plus/Minus
Query 47065 AGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAGTCTATGT 47124
||||||| || |||| || || || |||||| |||| ||||||||||| || |||
Sbjct 1040764 AGGAGTTCTTGACTGACGCTCTCCCTGTCGCCCTGCTCGGCATGAACGCCAAGCTCATGA 1040705
Query 47125 GCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGT-GCAGCTCGGACAACC-GAAATA 47182
| | || || ||||| || || || ||||| |||| ||| | || ||||| ||| ||
Sbjct 1040704 CCCAGTACATCGAGTTCGTTGCCGACCGTCTCCTGGTCGCA--TTGGGCAACCAGAAGTA 1040647
Query 47183 TTTTAATGCTCGTAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGCAAAACCAA 47242
| | || || || || || || ||| | ||||| || || | ||||| |||||
Sbjct 1040646 CTACCACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGCTGGCAAGACCAA 1040587
Query 47243 TTTTTTCGAGAAACGAGTCGGAGAGTA 47269
|| |||||||| || || || || ||
Sbjct 1040586 CTTCTTCGAGAAGCGTGTTGGTGACTA 1040560
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476610794880480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |