Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20cristatus_20[genbank_20GCA_5F001717485.1_202016-08-31] 68 sequences; 28,454,192 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 9e-16 seq66 84.2 2e-11 >seq1 Length=5851576 Score = 98.7 bits (108), Expect = 9e-16 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||||| ||||| ||||| || | | | ||||| || ||||||||||||||| || || Sbjct 2107847 ACGCAGACGCAACACCAAGTGCAAGGTGGACTCCTTCTGAATGTTGTAGTCGGACAGCGT 2107788 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 ||| ||| |||||||| || |||| |||| | ||||||||| || ||||| ||||| Sbjct 2107787 ACGACCATCCTCGAGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCAGGAGGAATGCC 2107728 Query 132022 TTCTTTATC 132030 || ||||| Sbjct 2107727 CTCCTTATC 2107719 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || ||||| || ||||||||||| || |||||| ||| || ||||| || |||| Sbjct 2108047 GATTCTTTCTGGATGTTGTAGTCCGACAGGGTACGACCATCCTCAAGCTGCTTTCCGGCG 2107988 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 | || ||||||||||| || ||||| || ||||| ||||| || ||| || | Sbjct 2107987 AAAATGAGACGCTGTTGGTCGGGAGGGATCCCTTCCTTATCTTGGATCTTTGACTTGACG 2107928 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | || ||||||||| | || | || || || || || || || Sbjct 2107927 TTGTCGATCGTGTCCGACGACTCCACTTCCAGAGTGATAGTCTTTCCGGTTAGGGTCTTA 2107868 Query 132110 ATGAAAATCTGCAT 132123 | |||||||||||| Sbjct 2107867 ACGAAAATCTGCAT 2107854 >seq66 Length=1272724 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/207 (70%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 47065 AGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAGTCTATGT 47124 ||||||| || |||| || || || |||||| |||| ||||||||||| || ||| Sbjct 1040764 AGGAGTTCTTGACTGACGCTCTCCCTGTCGCCCTGCTCGGCATGAACGCCAAGCTCATGA 1040705 Query 47125 GCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGT-GCAGCTCGGACAACC-GAAATA 47182 | | || || ||||| || || || ||||| |||| ||| | || ||||| ||| || Sbjct 1040704 CCCAGTACATCGAGTTCGTTGCCGACCGTCTCCTGGTCGCA--TTGGGCAACCAGAAGTA 1040647 Query 47183 TTTTAATGCTCGTAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGCAAAACCAA 47242 | | || || || || || || ||| | ||||| || || | ||||| ||||| Sbjct 1040646 CTACCACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGCTGGCAAGACCAA 1040587 Query 47243 TTTTTTCGAGAAACGAGTCGGAGAGTA 47269 || |||||||| || || || || || Sbjct 1040586 CTTCTTCGAGAAGCGTGTTGGTGACTA 1040560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610794880480