Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20cristatus_20[genbank_20GCA_5F001717485.1_202016-08-31]
68 sequences; 28,454,192 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq1 95.1 1e-14
>seq1
Length=5851576
Score = 95.1 bits (104), Expect = 1e-14
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116
|| || || || ||||||||| | ||||| | ||||| | ||| ||||| ||| |
Sbjct 2108272 TCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGCCCATCTTCCAACTGCTTACCAGCGAAG 2108213
Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176
|||||||||||||| |||||||| | ||||||||| || |||||| | || | | |
Sbjct 2108212 ATGAGACGCTGTTGGTCCGGCGGGATACCCTCTTTGTCCTGAATCTTGCTCTTGACGTTG 2108153
Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236
|| | ||||| | ||| ||||| | || || | || || || || || || ||
Sbjct 2108152 TCGATTGTGTCGGAACTTTCGACTTCCAATGTGATTGTCTTTCCAGTGAGGGTCTTGACG 2108093
Query 27237 AAGATTTGCATA 27248
||||| ||||||
Sbjct 2108092 AAGATCTGCATA 2108081
Score = 93.3 bits (102), Expect = 4e-14
Identities = 128/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 27060 TTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATG 27119
|| || || ||||||||||||| | |||| | || || ||||| ||||| ||| | ||
Sbjct 4105636 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 4105695
Query 27120 AGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCT 27179
|| |||||||| ||||| || | |||||| ||||| ||||||| || | | | ||
Sbjct 4105696 AGGCGCTGTTGGTCCGGGGGGATACCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCG 4105755
Query 27180 ACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAA 27238
| ||||| | | ||||| || || || || | || |||||||| || || || ||
Sbjct 4105756 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 4105814
Score = 87.8 bits (96), Expect = 2e-12
Identities = 123/173 (71%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
||||| || || || || ||||||||| | ||||| | ||||| | ||| |||||
Sbjct 2107529 GTAGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGCCCATCTTCCAACTGCTTACCA 2107470
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
||| | |||||||||||||| |||||||| | ||||| || || ||||||| | ||
Sbjct 2107469 GCGAAGATGAGACGCTGTTGGTCCGGCGGGATTCCCTCCTTGTCTTGGATCTTGCTCTTG 2107410
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGT 27223
| | | || | ||||| | | || || || ||||| || | ||||| ||
Sbjct 2107409 ACGTTGTCGATGGTGTCGCTCGACTCGACCTCAAGAGTGATGGTCTTGCCGGT 2107357
Score = 87.8 bits (96), Expect = 2e-12
Identities = 138/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
|| || ||||| || || |||||||| || | | || | || || ||||| || |||
Sbjct 2108050 GTGGATTCTTTCTGGATGTTGTAGTCCGACAGGGTACGACCATCCTCAAGCTGCTTTCCG 2107991
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
||| |||||||||||||||| || || || | || || ||||| |||||| ||
Sbjct 2107990 GCGAAAATGAGACGCTGTTGGTCGGGAGGGATCCCTTCCTTATCTTGGATCTTTGACTTG 2107931
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | | || | ||||| | | || ||||| ||||| |||| || || || || ||
Sbjct 2107930 ACGTTGTCGATCGTGTCCGACGACTCCACTTCCAGAGTGATAGTCTTTCCGGTTAGGGTC 2107871
Query 27231 TTCACAAAGATTTGCATA 27248
|| || || || ||||||
Sbjct 2107870 TTAACGAAAATCTGCATA 2107853
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424934047835616
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |