Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20cristatus_20[genbank_20GCA_5F001717485.1_202016-08-31] 68 sequences; 28,454,192 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq66 176 6e-39 seq12 123 3e-23 >seq66 Length=1272724 Score = 176 bits (194), Expect = 6e-39 Identities = 344/499 (69%), Gaps = 16/499 (3%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| ||||| ||||||||||||||||| ||||| || ||| | ||| |||||||| Sbjct 1040560 TAGTCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGTTCTCCATG 1040619 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAA-ATTGCTGGCACTCCAATCTGTTTGAGGAGACG 129846 || || || ||||| | | || | | | |||| ||||| | |||||||| Sbjct 1040620 AAGTCGAAGGGGTTGGTGGCGTGGTAGTACTTCTGGTTGCCCAATGCGACC-AGGAGACG 1040678 Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTT-AC 129905 || | ||| |||| ||||||| | ||| || || |||||| |||| ||| || Sbjct 1040679 GTCGGCAACGAACTCGATGTACTGGGTCATGAGCTTGGCGTTCATGCCGAGCAGGGCGAC 1040738 Query 129906 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGT 129965 | ||||| ||||| | |||| ||| |||||| | || || || | |||| | | Sbjct 1040739 A-GGGAGAGCGTCAGTCAAGAACTCCTGCTCAATAGCGACGGCCTCAGTGATGATGTCCT 1040797 Query 129966 GAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACG---GCAAACT 130022 | | | ||| | || | || | | | ||| ||| || || | ||||| | Sbjct 1040798 GGACGATCTGCTTGTCGGGGCGGTGGTTCAAGTGAGAGAACAG---CAAGCAAGCAAAGT 1040854 Query 130023 CCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGA 130082 | |||||||||||||||||| ||||| || || || |||||| ||||| ||||| | Sbjct 1040855 CGGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAGGTAAGACCAGGCATCA 1040914 Query 130083 GACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCA 130142 | || |||||||||| |||||| || | || ||||||||||||||||| ||||| | Sbjct 1040915 GGCCACGCTTCTTCAGCCAGAAGATAGAGGCGAACGAGCCAGAGAAGAAGATACCCTCAA 1040974 Query 130143 CACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACT--TTGT-ATCAAACCACT 130199 | ||||| || | ||||||| |||||||| ||||| |||| | | ||||| Sbjct 1040975 CGGCGGCGAAGGCCACGAGACGCGAAGCAAAGG---TGGACTCCTTGTCCTGGATCCACT 1041031 Query 130200 TCATCGCCCACTGCGCCTT 130218 | || ||||| | ||||| Sbjct 1041032 TGATAGCCCAATCAGCCTT 1041050 >seq12 Length=3061394 Score = 123 bits (136), Expect = 3e-23 Identities = 695/1104 (63%), Gaps = 34/1104 (3%) Strand=Plus/Plus Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864 |||||||||| || | | |||| | | || ||||||||||| || ||||| | | Sbjct 2885189 TGAACTGAATCGGAGCGGACGCGGCCATCGTACGCAGGTAGTACATGCCGGTCTTCAATC 2885248 Query 117865 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGA 117924 || ||||||| || | ||||| || | |||| | ||| || | |||| Sbjct 2885249 CCATCTTCCAGCCAGCAAAGTGCATACTGGTGATCTTGCCCATGGTGGGCTCCTTCATGT 2885308 Query 117925 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA 117984 || ||| | | ||||| || |||||| || || || || || ||||| | | | Sbjct 2885309 GGATGTTGAGAGACTGGGACTGGTCGATGTAGGCACCACGGTCGGCAGCCATCTGCAGGA 2885368 Query 117985 CATCCTTCATCTTG---ATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGA 118041 | | || | || |||||||| ||| |||| ||| ||| || || | |||| Sbjct 2885369 T---CGACCGCTGGGAAATCTCCCACACGGTCTTGTACAGGGCCTTGATGTCGGCCGGGA 2885425 Query 118042 TATCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTG 118101 | | ||| || |||| ||| |||||| | || || | | |||||| | | | Sbjct 2885426 TGTTGGGGATGTTCTGGACGGAGCCACCCTCGGCGATGATACGGTTCTTCATGTTGTCCG 2885485 Query 118102 ACCAGAGACCAATCTTTTTGAGATCCT----CCACGAGATGCTTATTGACAACAACAAAC 118157 |||||||||||| | || |||| | || || | |||||||| ||| Sbjct 2885486 ACCAGAGACCAAGGTCGACTAGGTCCTTGAGCAACCAGGGG----TTGACAACCTGGAAC 2885541 Query 118158 TCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTG 118217 ||||| || || || | ||||| || | ||||| ||||| |||||||| ||| Sbjct 2885542 TCACCGGCCAGCACACGACGGGAGTAGATGTTCGAGGTGTAGGGCTCGAAGCACTCGTTG 2885601 Query 118218 TTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGG 118277 |||| || || || ||| |||||||| ||||||| || || ||||| ||| Sbjct 2885602 AAGCCCAGAATCTGACTGGTACTGGCAGTGGGCATAGGTGCCACCAGCAGACTGTTGCGG 2885661 Query 118278 AGACCCTTTT---CCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTC 118334 | ||| | | | | ||| |||| || | ||||||||| || | | | Sbjct 2885662 ACACCAGTCTGGGCGATCTTGC---CCTTCAGCGTGTCCCAGTCCCAGAGGTCAGTGGGG 2885718 Query 118335 TCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTC 118394 | | |||||| || ||||||||||||| || || | || || ||||| | ||| Sbjct 2885719 GTACGGTCCCACATGTCGTACTGGAGGATACCCTGTGAGACGGGAGAGCCCTCGTAGGTC 2885778 Query 118395 TCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATT 118454 ||||| | || | ||| ||||| ||||| || | || |||| || || Sbjct 2885779 TCATAGGTACCGTGCTCCTTGGCCAAGTCGGAAGAGGCGGTCAAAGCACCGTGGTAGATG 2885838 Query 118455 GTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCAC 118514 || || || || || |||| ||| ||||| | || || || | || || || Sbjct 2885839 GTCTCGAAGATCTGAATGTTCAGCTGCTTAGCCTCAGCCGAGTCGAAAGGCAGACG-CAG 2885897 Query 118515 AA-AATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATT 118573 | || || | || || ||||| | |||||| || |||| ||||| || | ||| || Sbjct 2885898 AGCAAGGAAAGCGTCAGCAAGACCGTTGACACCAAGAGCAATAGGGCGGTGGCGCATGTT 2885957 Query 118574 AGACTTCCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATT 118630 |||| || ||| ||||| || | || | || || | || || || || Sbjct 2885958 GCTCTTCTTGGC---CTCAGGAACGGGGTAGTAGTTGATGTCAATGATCCGGTTCAGGTT 2886014 Query 118631 TTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAA---CTGCGAGTCTC 118687 || ||||| || ||| |||||||| | | ||| | | ||| | | Sbjct 2886015 GCGAACGAGAACCTGCACGACTTCGTGAAGCTTGCCAAAGTCATATTCGCCGCGGGCAGC 2886074 Query 118688 TTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTT 118747 || ||| | ||||||| || | || |||| || || |||| |||||| Sbjct 2886075 GTC---GACGAAAGTAGGAAGAGCAAGCGAAGCCAAGTTGCAAACAGCAACCTCATCAGG 2886131 Query 118748 ATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTT 118807 | || ||||||| || || || ||||| | ||| || || ||||| ||||||||||| Sbjct 2886132 AGCACTGTACTCAATGATCTCAGTGCAGAGGTTGGAGCTGCGGATGGTTCCCAAGTTCTT 2886191 Query 118808 TTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGT 118867 || || ||| ||| || ||||||||||| | |||| | || | || ||||| || Sbjct 2886192 CTGGTTGCTCTTCCGGTTGCAGGCATCCTTGTACAACATGAAAGGGTTACCGGTCTCGGT 2886251 Query 118868 TTGGGACTTGAGAATAGCCTTCCA 118891 |||| || |||||| || | ||| Sbjct 2886252 CTGGGCCTCGAGAATGGCGTACCA 2886275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434674330080