Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20cristatus_20[genbank_20GCA_5F001717485.1_202016-08-31] 68 sequences; 28,454,192 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq12 179 4e-40 seq1 149 7e-31 >seq12 Length=3061394 Score = 179 bits (198), Expect = 4e-40 Identities = 321/462 (69%), Gaps = 10/462 (2%) Strand=Plus/Minus Query 53242 TGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAA 53301 |||||| ||| |||| ||| ||| || ||||| || || || | || ||||||||||| Sbjct 2886933 TGAGACATACCACTTGATGTCCCAGAAATACTTCACCCATGCATCCCCCACCCTGTTCAA 2886874 Query 53302 CGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTC 53361 ||||||||| || || ||| || | |||||||| || | ||||||| ||| Sbjct 2886873 CGCTGGTACCCCGCAGCCCCAGTTGGCCTCGTGCTTCCTTGTCGACATGAAGGCAGACAG 2886814 Query 53362 GATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGG 53421 ||||| || ||||| || || || ||| ||||| |||||||| | ||||| Sbjct 2886813 TATCGAGGGTATCTATGACACCCTGAAGACCTGTGCTATGATCTCCAAAACCGCCGGTGG 2886754 Query 53422 TATCGGTATCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAAC 53479 ||| ||| || || || | || ||||| ||| ||| | || || || ||| Sbjct 2886753 TATTGGTCTCAACG--TCCACCGCATCCGTTCGACAGGCTCCTACATTGGCGGAACCAAC 2886696 Query 53480 GGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTC 53539 || | || | || |||| |||||||||||||| | ||||||||| || | |||||| Sbjct 2886695 GGTACCTCCAACGGTCTCGTCCCTATGCTCCGCGTGTACAACAACACTGCTAGATACGTC 2886636 Query 53540 AACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCC 53599 ||||||| || ||||| || | || ||||||||||| ||||| |||||| | Sbjct 2886635 GACCAGGGAGGCAACAAGCGTCCTGGTGCTTTTGCCATCTACCTTGAGCCCTGGCACTCG 2886576 Query 53600 GACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGAT--GCGCTGCC 53657 ||| | | ||||| | || ||||| ||| || ||| | || ||| | | ||| | Sbjct 2886575 GACGTCTTCGAGTTCTTGGATCTGCGCAAGAACCATGGTAAGGAGGAGGTCAGAGCT--C 2886518 Query 53658 GTGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATG 53698 |||||||||| ||| || |||||| ||| ||| | |||||| Sbjct 2886517 GTGACCTGTTCTAC-GCCTTGTGGACTCCCGACTTGTTCATG 2886477 Score = 116 bits (128), Expect = 4e-21 Identities = 148/199 (74%), Gaps = 6/199 (3%) Strand=Plus/Minus Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGAT--TG-ACATGA 55784 |||||| | ||| ||| |||||||||||| | ||| | || ||| || | ||| Sbjct 2885413 TCAAGGCCCTGTACAAGACCGTGTGGGAGATTTCCCAGCGG--TC-GATCCTGCAGATGG 2885357 Query 55785 GTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATC 55844 ||| || |||||||| ||||||||||||||||||||||| |||||| |||| || | | Sbjct 2885356 CTGCCGACCGTGGTGCCTACATCGACCAGTCCCAGTCTCTCAACATCCACATGAAGGAGC 2885297 Query 55845 CTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGG 55904 | | ||| |||| | | | ||||||||| || ||||||| |||| | ||||| | Sbjct 2885296 CCACCATGGGCAAGATCACCAGTATGCACTTTGCTGGCTGGAAGATGGGATTGAAGACCG 2885237 Query 55905 GTATGTACTATCTGCGGAC 55923 | |||||||| ||||| || Sbjct 2885236 GCATGTACTACCTGCGTAC 2885218 >seq1 Length=5851576 Score = 149 bits (164), Expect = 7e-31 Identities = 298/439 (68%), Gaps = 2/439 (0%) Strand=Plus/Plus Query 117134 GGAACGTAGCAGCTGAACCCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGC 117193 |||| || | | || | || || |||||||| |||| ||| || |||| |||||| || Sbjct 202541 GGAATGTTGGAACTCCAACCGGTACCGATACCGTCTGAACCGTTGATCAAAATCATGGGA 202600 Query 117194 ACGACAGGAACGTAGAACTCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGC 117253 ||||| || | ||||| ||| || || | || | ||| || ||| | ||| | ||| Sbjct 202601 ACGACCGGCATGTAGATCTCGGGTTCAATCTTCGCACCATCATCCTCGTTATACGTAAGC 202660 Query 117254 ACCGCATTGTCACTCGGATCGAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATG 117313 | || | ||| || || ||| ||| | || | || | ||||||||| ||||| Sbjct 202661 AGCGGCTCGTCGTGCGCATGGAAGATGCGCCGGGCGAAAGGCGACAGGCGAGTGTAAATG 202720 Query 117314 TAACGAGAGCTTGCAGCATCCTTGCCA-CCAGCAAGACGCGTACCGAATTGTCCACTCGG 117372 ||||||| ||| || || ||| ||| || |||| || ||||||| | |||||| || Sbjct 202721 TAACGAGCGCTGGCGGCGTCCGAACCACCCTGCAA-TCGACTACCGAAGTTTCCACTGGG 202779 Query 117373 CTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACC 117432 |||||| ||| | |||||| | || ||||||| || || | | ||||||||| Sbjct 202780 TTCCAAGGTGTTGATGTTGTTCGAACCGACAAAGTCCTGGGCAAGGCCGACAATCGTCTG 202839 Query 117433 TTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTG 117492 || | || ||||| || || || || ||| ||| |||| || |||| | Sbjct 202840 CTGCAATGAGGCATCACCGTGATGGTAGGCGGTCATACCCGAAACGTGACCAGCCAATTC 202899 Query 117493 AGCCACCTTCATGTCTGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTG 117552 | |||||||| || | | ||||| | || |||| ||| | ||||| ||||| Sbjct 202900 GACGACCTTCATATCCTTCTTAAGGTTGCGCCGGAAACAGGTATACAGGACCTTACGCTG 202959 Query 117553 ACTTGGCTTCAGACCATCC 117571 || ||||||||||||||| Sbjct 202960 ACCGGGCTTCAGACCATCC 202978 Score = 84.2 bits (92), Expect = 2e-11 Identities = 134/191 (70%), Gaps = 6/191 (3%) Strand=Plus/Plus Query 119003 TTGCTCATGTTGTCGGTCCAAGATTGCATGTAGATCTTCTT---ACC---ATCACTAATT 119056 ||| |||| ||| ||||||||| ||| |||| |||| || || ||| || Sbjct 204518 TTGGTCATATTGGCGGTCCAAGTCTGCTTGTACTTCTTTTTTTGACGCGAATCCTGCGTT 204577 Query 119057 TTGATGTTAAATTTCGAACTGAACACGTTGGCTAGCTTGGCACCGTATCCGTTCCGACCA 119116 | |||| | |||| | ||| |||||| |||||||||||| | ||||| |||||| Sbjct 204578 TCGATGGTGAATTCGGTGGAGAAGACGTTGCAAAGCTTGGCACCGAAACCGTTACGACCA 204637 Query 119117 CCGGTCACGCGCTGCTCCTCGTCGTTGTAGTTGGAGCTGGTCAAAAGGTGCCCAAAGATG 119176 |||||||| ||| | || | |||||||||| ||| | ||||| || ||||| Sbjct 204638 CCGGTCACTTTCTGTTGGGTATCATCGTAGTTGGAGGAGGTGAGGAGGTGACCGAAGATC 204697 Query 119177 AGCTCGGGGAT 119187 || |||||||| Sbjct 204698 AGTTCGGGGAT 204708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215534866400