Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20cristatus_20[genbank_20GCA_5F001717485.1_202016-08-31] 68 sequences; 28,454,192 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq1 107 1e-18 seq45 93.3 3e-14 >seq1 Length=5851576 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | ||||| | |||| ||||| ||||||||||| || ||||| || || || Sbjct 2108308 CCGCCACGGAGACGAAGGACCAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 2108249 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || ||| | ||||| | || ||||| || || || | |||||||||||||||||| Sbjct 2108248 AGAGTGCGCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGTTGGTCCGGCGGG 2108189 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||| ||||| ||| || | || ||| | |||||||| || || || Sbjct 2108188 ATACCCTCTTTGTC-CTGAATCTTGCTCTTGACGTTGTCGATTGTGTCGGAACTTTCGAC 2108130 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || || || || || || | || || || || |||||||| Sbjct 2108129 TTCCAATGTGATTGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 2108082 Score = 98.7 bits (108), Expect = 6e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | |||| ||||| || |||||| || ||||| || || || || || ||| Sbjct 2107550 AGACGGAGAACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGC 2107491 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||| | || ||||| || || || | |||||||||||||||||| | ||||||| Sbjct 2107490 CCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGTTGGTCCGGCGGGATTCCCTCC 2107431 Query 34609 TTGTCTGTGATCTT 34622 |||||| |||||| Sbjct 2107430 TTGTCTTGGATCTT 2107417 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 |||||||||||||| || | ||| |||||| |||||||| || || || || || || Sbjct 2107843 AGACGCAACACCAAGTGCAAGGTGGACTCCTTCTGAATGTTGTAGTCGGACAGCGTACGA 2107784 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || || || ||||| || || |||||||||||||| || || | |||||| Sbjct 2107783 CCATCCTCGAGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCAGGAGGAATGCCCTCC 2107724 Query 34609 TTGTCTGTGATCTT 34622 || || |||||| Sbjct 2107723 TTATCCTGGATCTT 2107710 Score = 91.5 bits (100), Expect = 9e-14 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 || |||||| || || || ||||| || || || || || || | || ||||| || Sbjct 2108056 TGAAGAGTGGATTCTTTCTGGATGTTGTAGTCCGACAGGGTACGACCATCCTCAAGCTGC 2107997 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || ||||| || || | |||||||||||| || || | || ||||| ||| |||| || Sbjct 2107996 TTTCCGGCGAAAATGAGACGCTGTTGGTCGGGAGGGATCCCTTCCTTATCTTGGATC-TT 2107938 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 || || ||| | || ||||| ||||||||||| || || || || ||||| Sbjct 2107937 TGACTTGACGTTGTCGATCGTGTCCGACGACTCCACTTCCAGAGTGATAGTCTTTCCGGT 2107878 Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706 || || || || ||||||||||| Sbjct 2107877 TAGGGTCTTAACGAAAATCTGCAT 2107854 >seq45 Length=2308221 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 || |||| ||| | || || || |||||| || ||||| || || ||||| || || Sbjct 1966206 AGGCGCAGCACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGG 1966147 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| || || || ||||| || || || | ||||||||||||||| || | ||||||| Sbjct 1966146 CCGTCCTCCAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGGGGGATTCCCTCC 1966087 Query 34609 TTGTCTGTGATCTT 34622 |||||| | ||||| Sbjct 1966086 TTGTCTATTATCTT 1966073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729339167844