Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20cristatus_20[genbank_20GCA_5F001717485.1_202016-08-31] 68 sequences; 28,454,192 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq1 149 1e-30 seq45 87.8 4e-12 >seq1 Length=5851576 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||||||||| |||||||||||||| |||| ||||| || | || || | ||||| Sbjct 2108065 AGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCCGACAGGGTACGACCATCC 2108006 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || ||||| || || || ||||||||||| || || |||||||| ||| Sbjct 2108005 TCAAGCTGCTTTCCGGCGAAAATGAGACGCTGTTGGTCGGGAGGGATCCCTTCCTTATCT 2107946 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 ||||||||| ||| || ||||| ||||| || | ||||| || | ||||| ||| Sbjct 2107945 TGGATCTTTGACTTGACGTTGTCGATCGTGTCCGACGACTCCACTTCCAGAGTGATAGTC 2107886 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || | || || | ||| | ||||| Sbjct 2107885 TTTCCGGTTAGGGTCTTAACGAAAATCTGCAT 2107854 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| |||||||| ||| || || |||| ||||| |||| | ||| | ||||||| Sbjct 2108293 AGGACCAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGCCCATCT 2108234 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | |||||| ||||||||||| || || |||||||| ||||| ||||| || ||||| Sbjct 2108233 TCCAACTGCTTACCAGCGAAGATGAGACGCTGTTGGTCCGGCGGGATACCCTCTTTGTCC 2108174 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| || ||||| ||||| || |||| || || || ||||| ||| Sbjct 2108173 TGAATCTTGCTCTTGACGTTGTCGATTGTGTCGGAACTTTCGACTTCCAATGTGATTGTC 2108114 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || | || || | ||| | ||||| Sbjct 2108113 TTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 2108082 Score = 132 bits (146), Expect = 1e-25 Identities = 142/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || |||||||| || || || || |||| ||||| |||| | ||| | ||||||| Sbjct 2107544 AGAACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGCCCATCT 2107485 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | |||||| ||||||||||| || || |||||||| ||||| || || ||||||||| Sbjct 2107484 TCCAACTGCTTACCAGCGAAGATGAGACGCTGTTGGTCCGGCGGGATTCCCTCCTTGTCT 2107425 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||||||||| | || || || | ||||| ||| Sbjct 2107424 TGGATCTTGCTCTTGACGTTGTCGATGGTGTCGCTCGACTCGACCTCAAGAGTGATGGTC 2107365 Query 225682 TTGCCCGT 225689 ||||| || Sbjct 2107364 TTGCCGGT 2107357 Score = 105 bits (116), Expect = 2e-17 Identities = 127/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 ||||| || || || | ||||| |||| || || | ||||| || |||||||| || Sbjct 2107822 GTGGACTCCTTCTGAATGTTGTAGTCGGACAGCGTACGACCATCCTCGAGCTGCTTGCCG 2107763 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636 |||||||| | || |||||||| || ||||| || ||||| || |||||||| ||| Sbjct 2107762 GCGAAGATCAAACGCTGTTGGTCAGGAGGAATGCCCTCCTTATCCTGGATCTTCGACTTG 2107703 Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 ||| ||||||||||| || || || || | ||||| |||||||| || Sbjct 2107702 ACATTATCGATGGTGTCGCTGGACTCAACCTCGAGGGTGATGGTCTTGCCAGT 2107650 Score = 102 bits (112), Expect = 2e-16 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| ||| || || | ||||| || |||||||| ||||||||||| Sbjct 4105636 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGATC 4105695 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || || |||||||| || || ||||| ||||| || |||||||| ||| || ||| Sbjct 4105696 AGGCGCTGTTGGTCCGGGGGGATACCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCG 4105755 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 |||||||| | || ||||| | || || ||||| ||||||| || || | ||| Sbjct 4105756 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 4105814 >seq45 Length=2308221 Score = 87.8 bits (96), Expect = 4e-12 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || ||||| || || || || || |||| ||||| || | | ||| Sbjct 1966210 ACGCAGGCGCAGCACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGT 1966151 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || |||||||| ||||||||||| || || |||||||| || || || || Sbjct 1966150 GCGGCCGTCCTCCAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGGGGGGATTCC 1966091 Query 225612 TTCCTTGTCTTGGATCTT 225629 ||||||||| ||||| Sbjct 1966090 CTCCTTGTCTATTATCTT 1966073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192530161007192