Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20cristatus_20[genbank_20GCA_5F001717485.1_202016-08-31]
68 sequences; 28,454,192 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq1 140 3e-28
seq45 113 4e-20
>seq1
Length=5851576
Score = 140 bits (154), Expect = 3e-28
Identities = 165/222 (74%), Gaps = 10/222 (5%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| ||||||| |||| ||| ||||||||||||||| ||||||||
Sbjct 2107852 CCACCACGCAGACGCAACACCAAGTGCAAGGTGGACTCCTTCTGAATGTTGTAGTCGGAC 2107793
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || | || |||||||||||||||||||| |||| ||||||||||| | |||
Sbjct 2107792 AGCGTACGACCATCCTCGAGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCAGGAGGA 2107733
Query 41756 ACGCTCTCCTTGTCCATGATTTT----TTG-CTTCAACGACGACACAGTGTCGCTCGACT 41810
| || |||||| ||| ||| || ||| | | | ||| | |||||||| ||||
Sbjct 2107732 ATGCCCTCCTTATCCTGGATCTTCGACTTGACATTATCGATG-----GTGTCGCTGGACT 2107678
Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852
| ||||| | || || || || || || || ||||| ||||
Sbjct 2107677 CAACCTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACGA 2107636
Score = 136 bits (150), Expect = 4e-27
Identities = 174/231 (75%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
||||| || ||||| | ||||| || ||||||||||||||||| ||||| |||||||||
Sbjct 2108308 CCGCCACGGAGACGAAGGACCAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 2108249
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCGGG 41754
|| |||||| | || || | |||||| || ||||| || || |||||||||||| |||||
Sbjct 2108248 AGAGTGCGCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGTTGGTCCGGCGGG 2108189
Query 41755 A-ACGCTCTCCTTGTCCATGATTTTTTGCT-TCAACGACGAC-ACAGTGTCGCTCGACTC 41811
| || |||| |||||| ||| | ||||| | ||| | | | |||||| ||
Sbjct 2108188 ATACCCTCT--TTGTCC-TGA-ATCTTGCTCTTGACGTTGTCGATTGTGTCGGAACTTTC 2108133
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| |||| || || || || || || || ||||| ||||| ||||||||
Sbjct 2108132 GACTTCCAATGTGATTGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCAT 2108082
Score = 129 bits (142), Expect = 5e-25
Identities = 140/183 (77%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732
||||||| ||||| |||||| |||||||| | || || |||||||| || ||||| |
Sbjct 4105634 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAGA 4105693
Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792
|||||||||||||||||| ||| | | |||||| ||| || | || || | ||| |
Sbjct 4105694 TCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTATCC-TGGATCTTGGCCTTGACGTTG 4105752
Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851
| | |||||||||||||| || || | || || || ||||||||||| ||||| |||
Sbjct 4105753 TCGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 4105812
Query 41852 AAA 41854
|||
Sbjct 4105813 AAA 4105815
Score = 114 bits (126), Expect = 1e-20
Identities = 150/205 (73%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| | ||||| || || || ||||||||| ||||| ||||||||
Sbjct 2107560 GCCACCACGGAGACGGAGAACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGA 2107501
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
||| |||||| | || || | |||||| || ||||| || || ||||||||||||| ||
Sbjct 2107500 GAGAGTGCGCCCATCTTCCAACTGCTTACCAGCGAAGATGAGACGCTGTTGGTCCGGCGG 2107441
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
| | ||||||||| ||| || ||| ||| | | | |||||||||||||| |
Sbjct 2107440 GATTCCCTCCTTGTCTTGGATCTTGCTCTT-GACGTTGTCGATGGTGTCGCTCGACTCGA 2107382
Query 41814 CCTCCACCGTTATCGTTTTACCCGT 41838
|||| | || || || || || ||
Sbjct 2107381 CCTCAAGAGTGATGGTCTTGCCGGT 2107357
Score = 114 bits (126), Expect = 1e-20
Identities = 166/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | || || || || ||| || ||||| ||||| ||||| ||
Sbjct 2108080 CCACCACGGAGACGAAGGACAAGGTGAAGAGTGGATTCTTTCTGGATGTTGTAGTCCGAC 2108021
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGG 41754
||||| || | || || |||||||| |||||||| || || ||||||||||| | |||
Sbjct 2108020 AGGGTACGACCATCCTCAAGCTGCTTTCCGGCGAAAATGAGACGCTGTTGGTCGGGAGGG 2107961
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
| | || ||||| || ||| ||| ||| ||| | | | ||||| ||||||||
Sbjct 2107960 ATCCCT-TCCTTATCTTGGATCTTTGACTT-GACGTTGTCGATCGTGTCCGACGACTCCA 2107903
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
| |||| || || || || || || || ||||| ||||||||||||||
Sbjct 2107902 CTTCCAGAGTGATAGTCTTTCCGGTTAGGGTCTTAACGAAAATCTGCAT 2107854
>seq45
Length=2308221
Score = 113 bits (124), Expect = 4e-20
Identities = 113/147 (77%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691
||| || || || || || | ||| || ||||| || ||||||||| ||||| |||||
Sbjct 1966219 ACCACCACCACGCAGGCGCAGCACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTC 1966160
Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751
|| || ||||| |||| || |||||||| || ||||| ||||| |||||||||||||
Sbjct 1966159 CGAAAGAGTGCGGCCGTCCTCCAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCCGG 1966100
Query 41752 GGGAACGCTCTCCTTGTCCATGATTTT 41778
||| | | ||||||||| || || ||
Sbjct 1966099 GGGGATTCCCTCCTTGTCTATTATCTT 1966073
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462303607041600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |