Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576635.1_202016-02-26] 999 sequences; 35,835,174 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq28 199 5e-46 >seq28 Length=119586 Score = 199 bits (220), Expect = 5e-46 Identities = 595/910 (65%), Gaps = 15/910 (2%) Strand=Plus/Minus Query 53951 TCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 54010 ||||| ||||| || |||||| | |||| ||||| || | ||||| | | | | Sbjct 114213 TCAAATTCGTCACCATAAACATCGGCCAAGCCAGGGGCCTCGTTAGGACAGAAGAGAGTC 114154 Query 54011 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 54069 || || |||| | | ||||| ||||| || | || ||| |||| || || ||| || Sbjct 114153 CAGTCGCCGTTGGCTTCAACTCGCTTCATGAACAAGTCCGGAGTCCAGAGGGC-ATAGAA 114095 Query 54070 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 54129 ||||| | || ||| |||||| || || ||||| |||||||||||| | | Sbjct 114094 GAGATCGCGGGCTCTCACTTCCTCTTTACCGTGGTTCTTGCGGAGATCGAGGAACTCGAA 114035 Query 54130 AATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCC 54189 | ||| | ||||| || |||||||| |||| | | | || || || ||||||||||| Sbjct 114034 GACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCACCTGGACGCTTGTTTCCTCC 113975 Query 54190 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 54249 ||| |||| ||||| || ||||| || | || | | ||| |||| |||||||||||| Sbjct 113974 CTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATGGGAACAATACCATTGGA 113915 Query 54250 TGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGA 54307 | ||| ||||| || || ||| || | ||||| || | | |||| ||| Sbjct 113914 GGAACCGTTGGTACCACCAATGTAGGAGCCGGTAGCACGGATGCGGTGCACATTG--AGA 113857 Query 54308 CCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 54367 || || || || || | || ||||| ||||| ||| || | ||| ||||| || || Sbjct 113856 CCGATTCCACCAGCGGTCTTCGAGATCAATGCACATGTCTTGAGCGTGTCATAAATACCT 113797 Query 54368 TCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 54427 || || ||||| ||| |||| | | ||||| || || | || | || || Sbjct 113796 TCGATGCTATCCTCCTTCATATCGACAAGAAAGCATGAAGCAAGCTGAGGCTGAGGGGTA 113737 Query 54428 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 54487 || ||||| || || || || || || || || || | || | ||| | | | || Sbjct 113736 CCAGCATTGAACAAAGTCGGCGAGGCATGGGTGAAATACTTCTGAGACATCAAGTGATAG 113677 Query 54488 GTCTCGATAGCTGAGTCTATATCCCATT--GATGAATTCCTACTGCGACACGCATTAACA 54545 ||||||||||| ||| || |||| |||||| || || | ||||||||| || | Sbjct 113676 GTCTCGATAGC--CTTCTCAATGTCATTACCATGAATACCAACAGAGACACGCATCAAAA 113619 Query 54546 TGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGA-TTTTTCCAAA 54604 ||||||||| | |||| | | ||| | || | | || || || | | Sbjct 113618 GGTGCTGAGGACGTTCAGCAACCTTTCCATCAATCCGARGYATTTATGACACGCTCAAGA 113559 Query 54605 GTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGA 54662 || || || || ||| ||||||| ||||| || || ||||| | |||| | ||||||| Sbjct 113558 GTCTTGAAGCCGAAAAAGTTGTAGTTGAAA--TCGCGGTCGTACACAATAGCGGAGTTGA 113501 Query 54663 GTTTATCCTTATATTTGTTAACTACATCCATGGTAATACTTGAAATAATCGGAGAATGTT 54722 ||| || || ||| | |||| || || |||| || || || | | ||| Sbjct 113500 GTTCGTCGGCATGTTTCATGACTATCTCGTACGTTTCCTTTGATATCATTGGGGCAGGTT 113441 Query 54723 TCCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGttttt 54782 || ||| || || |||| || | ||| || || || ||| | || | Sbjct 113440 TCTTATTCTTTGGGTTGATGTAATGGTATAGGTCTGAAATAACCAGGGAGAATTGCTTCT 113381 Query 54783 ttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGAT 54842 |||||| | || || || || || ||||| | ||| || |||||||| || || |||| Sbjct 113380 TTGTTTGCTARTGAAGGTTCGAAACAGCTATACGAGCAGCAAGAATGGCGTAGTCTGGAT 113321 Query 54843 GTTGTGTAGT 54852 || ||||| Sbjct 113320 GTGTGGTAGT 113311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593714185901520