Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576635.1_202016-02-26] 999 sequences; 35,835,174 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq28 183 4e-41 >seq28 Length=119586 Score = 183 bits (202), Expect = 4e-41 Identities = 417/621 (67%), Gaps = 10/621 (2%) Strand=Plus/Minus Query 63189 TCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGAC 63248 || || ||||| || |||||| | |||| | ||| || | ||||| | | | | Sbjct 114213 TCAAATTCGTCACCATAAACATCGGCCAAGCCAGGGGCCTCGTTAGGACAGAAGAGAGTC 114154 Query 63249 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 63307 || || |||| | | ||||| ||||| || | || ||| |||| || || ||| || Sbjct 114153 CAGTCGCCGTTGGCTTCAACTCGCTTCATGAACAAGTCCGGAGTCCAGAGGGC-ATAGAA 114095 Query 63308 TAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63367 ||||| | | ||| |||||| || || ||||| |||||||||||| | | Sbjct 114094 GAGATCGCGGGCTCTCACTTCCTCTTTACCGTGGTTCTTGCGGAGATCGAGGAACTCGAA 114035 Query 63368 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63427 | ||| | ||||| || |||||||| ||||| | | | || || || ||||||||||| Sbjct 114034 GACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCACCTGGACGCTTGTTTCCTCC 113975 Query 63428 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63487 ||| |||| ||||| || ||||| || | || | | ||| |||| |||||| || || Sbjct 113974 CTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATGGGAACAATACCATTGGA 113915 Query 63488 TATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAAT--ATTACTAATTGATAGA 63545 ||| |||||||| || ||| || | ||||| || | | |||| ||| Sbjct 113914 GGAACCGTTGGTACCACCAATGTAGGAGCCGGTAGCACGGATGCGGTGCACATTG--AGA 113857 Query 63546 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCT 63605 || ||||| || || | || ||||| ||||| ||| || | ||||||||| || ||| Sbjct 113856 CCGATTCCACCAGCGGTCTTCGAGATCAATGCACATGTCTTGAGCGTGTCATAAATACCT 113797 Query 63606 TCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTT 63665 || |||||||| || |||| | | ||||| || || | || | ||| || Sbjct 113796 TCGATGCTATCCTCCTTCATATCGACAAGAAAGCATGAAGCAAGCTGAGGCTGAGGGGTA 113737 Query 63666 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 63725 || ||||| || || || || || || || || || | || | ||| | | | || Sbjct 113736 CCAGCATTGAACAAAGTCGGCGAGGCATGGGTGAAATACTTCTGAGACATCAAGTGATAG 113677 Query 63726 GTCTCAATAGCTGAGTCTATATCCCATT--GATGAATTCCTACTGCGACACGCATTAACA 63783 ||||| ||||| ||| || |||| |||||| || || | ||||||||| || | Sbjct 113676 GTCTCGATAGC--CTTCTCAATGTCATTACCATGAATACCAACAGAGACACGCATCAAAA 113619 Query 63784 TGTGCTGAGGTCTTTCAACAA 63804 ||||||||| | |||| ||| Sbjct 113618 GGTGCTGAGGACGTTCAGCAA 113598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629809735152720