Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576635.1_202016-02-26] 999 sequences; 35,835,174 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq28 208 1e-48 >seq28 Length=119586 Score = 208 bits (230), Expect = 1e-48 Identities = 597/910 (66%), Gaps = 15/910 (2%) Strand=Plus/Minus Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920 || || ||||| || |||||||| | || ||||| |||| |||||| | | | | Sbjct 114213 TCAAATTCGTCACCATAAACATCGGCCAAGCCAGGGGCCTCGTTAGGACAGAAGAGAGTC 114154 Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 79979 || || || | | | ||||| ||||| || | || ||| |||| || || ||| || Sbjct 114153 CAGTCGCCGTTGGCTTCAACTCGCTTCATGAACAAGTCCGGAGTCCAGAGGGC-ATAGAA 114095 Query 79980 TAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 80039 ||||| | || ||| ||||| || || ||||| |||||||||||| | | Sbjct 114094 GAGATCGCGGGCTCTCACTTCCTCTTTACCGTGGTTCTTGCGGAGATCGAGGAACTCGAA 114035 Query 80040 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCC 80099 | ||| | ||||| || |||||||| ||||| | | | || || || ||||||||||| Sbjct 114034 GACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCACCTGGACGCTTGTTTCCTCC 113975 Query 80100 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 80159 ||| |||| ||||| || ||||| || | || | | ||| |||| |||||||||||| Sbjct 113974 CTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATGGGAACAATACCATTGGA 113915 Query 80160 TGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGA 80217 | ||| ||||| || || ||| || | ||||| || | | |||| ||| Sbjct 113914 GGAACCGTTGGTACCACCAATGTAGGAGCCGGTAGCACGGATGCGGTGCACATTG--AGA 113857 Query 80218 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 80277 || ||||| || || | || ||||| ||||| ||| || | ||| ||||| || || Sbjct 113856 CCGATTCCACCAGCGGTCTTCGAGATCAATGCACATGTCTTGAGCGTGTCATAAATACCT 113797 Query 80278 TCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 80337 || |||||||| || |||| | | ||||| || || | || | || || Sbjct 113796 TCGATGCTATCCTCCTTCATATCGACAAGAAAGCATGAAGCAAGCTGAGGCTGAGGGGTA 113737 Query 80338 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTAC 80397 || ||||| || || || || || || || || || | || | ||||| | | || Sbjct 113736 CCAGCATTGAACAAAGTCGGCGAGGCATGGGTGAAATACTTCTGAGACATCAAGTGATAG 113677 Query 80398 GTCTCAATAGCTGATTCTATATCCCATT--GATGAATTCCTACCGCGACACGCATTAACA 80455 ||||| ||||| |||| || |||| |||||| || || | ||||||||| || | Sbjct 113676 GTCTCGATAGC--CTTCTCAATGTCATTACCATGAATACCAACAGAGACACGCATCAAAA 113619 Query 80456 TGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGA-TTTTTCCAAA 80514 ||||||||| | |||| | | ||| || || | || || || | | Sbjct 113618 GGTGCTGAGGACGTTCAGCAACCTTTCCATCAATCCGARGYATTTATGACACGCTCAAGA 113559 Query 80515 GTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGA 80572 || || || || ||| ||||||| ||||| || || ||||| | |||| | ||||||| Sbjct 113558 GTCTTGAAGCCGAAAAAGTTGTAGTTGAAA--TCGCGGTCGTACACAATAGCGGAGTTGA 113501 Query 80573 GTTTATCCTTATATTTGTTAACTACATCCATGGTGATACTTGAAATAATCGGAGAATGTT 80632 ||| || || ||| | |||| || || |||| || || || | | ||| Sbjct 113500 GTTCGTCGGCATGTTTCATGACTATCTCGTACGTTTCCTTTGATATCATTGGGGCAGGTT 113441 Query 80633 TCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttttt 80692 || ||| || || || | || | | ||| || || || ||| | || | Sbjct 113440 TCTTATTCTTTGGGTTGATGTAATGGTATAGGTCTGAAATAACCAGGGAGAATTGCTTCT 113381 Query 80693 ttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGAT 80752 |||||| || || || || || || ||||| | || || | |||||| || ||||||| Sbjct 113380 TTGTTTGCTARTGAAGGTTCGAAACAGCTATACGAGCAGCAAGAATGGCGTAGTCTGGAT 113321 Query 80753 GTTGTGTAGT 80762 || ||||| Sbjct 113320 GTGTGGTAGT 113311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718259830618360