Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576635.1_202016-02-26] 999 sequences; 35,835,174 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq28 196 6e-45 seq3 98.7 1e-15 >seq28 Length=119586 Score = 196 bits (216), Expect = 6e-45 Identities = 594/910 (65%), Gaps = 15/910 (2%) Strand=Plus/Minus Query 71944 TCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGAC 72003 || || ||||| || || ||| | | || ||||| || || ||||| | | | | Sbjct 114213 TCAAATTCGTCACCATAAACATCGGCCAAGCCAGGGGCCTCGTTAGGACAGAAGAGAGTC 114154 Query 72004 CACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 72062 || || || | | | ||||| ||||| || | || ||| |||| || || ||| || Sbjct 114153 CAGTCGCCGTTGGCTTCAACTCGCTTCATGAACAAGTCCGGAGTCCAGAGGGC-ATAGAA 114095 Query 72063 TAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 72122 ||||| | || ||| ||||| || || ||||| |||||||||||| | | Sbjct 114094 GAGATCGCGGGCTCTCACTTCCTCTTTACCGTGGTTCTTGCGGAGATCGAGGAACTCGAA 114035 Query 72123 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCC 72182 | ||| | ||||| || |||||||| ||||| | | | || || || ||||||||||| Sbjct 114034 GACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCACCTGGACGCTTGTTTCCTCC 113975 Query 72183 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 72242 ||| |||| ||||| || ||||| || | || | | ||| |||| |||||||||||| Sbjct 113974 CTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATGGGAACAATACCATTGGA 113915 Query 72243 TGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTGCTAATTGATAGA 72300 | ||| ||||| || || ||| || | ||||| || ||| |||| ||| Sbjct 113914 GGAACCGTTGGTACCACCAATGTAGGAGCCGGTAGCACGGATGCGGTGCACATTG--AGA 113857 Query 72301 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 72360 || ||||| || || | || ||||| ||||| ||| || | ||| ||||| || || Sbjct 113856 CCGATTCCACCAGCGGTCTTCGAGATCAATGCACATGTCTTGAGCGTGTCATAAATACCT 113797 Query 72361 TCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 72420 || || ||||| ||| |||| | | ||||| || || | || | || || Sbjct 113796 TCGATGCTATCCTCCTTCATATCGACAAGAAAGCATGAAGCAAGCTGAGGCTGAGGGGTA 113737 Query 72421 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTAC 72480 || ||||| || || || || || || || || || | || | ||||| | | || Sbjct 113736 CCAGCATTGAACAAAGTCGGCGAGGCATGGGTGAAATACTTCTGAGACATCAAGTGATAG 113677 Query 72481 GTCTCAATAGCTGATTCTATATCCCATT--GATGTATTCCTACCGCGACACGCATTAACA 72538 ||||| ||||| |||| || |||| ||| || || || | ||||||||| || | Sbjct 113676 GTCTCGATAGC--CTTCTCAATGTCATTACCATGAATACCAACAGAGACACGCATCAAAA 113619 Query 72539 TATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGA-TTTTTCCAAA 72597 |||||||| | |||| | | ||| || || | || || || | | Sbjct 113618 GGTGCTGAGGACGTTCAGCAACCTTTCCATCAATCCGARGYATTTATGACACGCTCAAGA 113559 Query 72598 GTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGA 72655 || || || || ||| ||||||| ||||| || || ||||| | |||| | || |||| Sbjct 113558 GTCTTGAAGCCGAAAAAGTTGTAGTTGAAA--TCGCGGTCGTACACAATAGCGGAGTTGA 113501 Query 72656 GTTTATCCTTATATTTGTTAACTATATCCATGGTGATACTTGAAATAATCGGAGAATGTT 72715 ||| || || ||| | ||||| || || |||| || || || | | ||| Sbjct 113500 GTTCGTCGGCATGTTTCATGACTATCTCGTACGTTTCCTTTGATATCATTGGGGCAGGTT 113441 Query 72716 TCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttttt 72775 || ||| || || || | || | | ||| || || || ||| | || | Sbjct 113440 TCTTATTCTTTGGGTTGATGTAATGGTATAGGTCTGAAATAACCAGGGAGAATTGCTTCT 113381 Query 72776 ttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGAT 72835 |||||| || || || || || || ||||| | || || |||||||| || ||||||| Sbjct 113380 TTGTTTGCTARTGAAGGTTCGAAACAGCTATACGAGCAGCAAGAATGGCGTAGTCTGGAT 113321 Query 72836 GTTGTGTAGT 72845 || ||||| Sbjct 113320 GTGTGGTAGT 113311 >seq3 Length=232150 Score = 98.7 bits (108), Expect = 1e-15 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 42079 GTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 42138 ||| ||||||||||| | | || | |||||||| || || || |||||||| | ||| Sbjct 215715 GTGGAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAATGTAAGACCGGGCATCAAGCC 215774 Query 42139 ACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGC 42198 |||||| || ||||| || ||||| || || ||||| || |||||||| || || || || Sbjct 215775 ACGCTTCTTCAGCCAGAAGATAGAGGCGAAGGATCCGGAGAAGAAGATACCCTCAACAGC 215834 Query 42199 CGCAAAGGC 42207 || ||||| Sbjct 215835 GGCGAAGGC 215843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671130819149240