Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576635.1_202016-02-26] 999 sequences; 35,835,174 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq3 129 9e-25 seq28 89.7 8e-13 >seq3 Length=232150 Score = 129 bits (142), Expect = 9e-25 Identities = 333/502 (66%), Gaps = 23/502 (5%) Strand=Plus/Minus Query 125361 ATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCC 125420 || ||||| |||||| | |||| || || |||||| | || | |||| | | || Sbjct 215915 ATTCGTAAGAAGGCTGACTGGGCTATCCGCTGGATCCAGGATCAGGAGTCGACCTTCGGT 215856 Query 125421 GACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCC 125480 | | || ||||| |||||||| || ||||| |||||||| || || || || | Sbjct 215855 CAGCGTCTCGTGGCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCCGGATCCTTCGCCTCT 215796 Query 125481 ATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATA 125540 ||||| ||||| |||||||| || | |||||||| || || | |||||| |||| Sbjct 215795 ATCTTCTGGCTGAAGAAGCGTGGCTTGATGCCCGGTCTTACATTCTCCAACGAGCTTATC 215736 Query 125541 TCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT--ATCTG 125597 ||||| || ||||| || ||| ||||||||| || || || ||||| || | Sbjct 215735 TCTCGTGATGAGGGTCTCCACACTGACTTTGCTTGCCTGCTCTTCTCGCACCTGAACAAC 215676 Query 125598 CGTCCCGAGTG-CAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAG 125656 || ||||| ||||| | || | || ||| || || || || Sbjct 215675 CGCCCCGACCCTCAGATTGTG----GAGGACGTTATCG----TGGAA-----GCTGTCTC 215629 Query 125657 GATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAA 125716 || || | ||||| || || || | || || | | |||||||||||| ||| Sbjct 215628 CATTGAGAAGGAGTTCCTGACTGACGCTCTTCCTTGCGCTCTTCTTGGCATGAACTCCAA 215569 Query 125717 GCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCG 125776 | |||||| ||||||| ||||| || || || ||||| ||| || | |||| Sbjct 215568 CTTGATGTGCCAGTACATTGAGTTCGTCGCCGACCGTCTCCTGGTCGCTCT---TGGCAA 215512 Query 125777 CAAGATTTAC---AACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGG 125833 ||| | ||| || |||| || || ||||| |||||| || ||| || || | || Sbjct 215511 CAACAAGTACTTCAATGCCACCAACCCATTTGACTTCATGGACAACATCTCCCTGGCCGG 215452 Query 125834 TAAGACCAACTTTTTCGAGAAG 125855 |||||||||||| ||||||||| Sbjct 215451 TAAGACCAACTTCTTCGAGAAG 215430 Score = 118 bits (130), Expect = 2e-21 Identities = 195/279 (70%), Gaps = 2/279 (1%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| ||||| ||||||| || ||||| | ||| || | ||||| Sbjct 216309 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAAATTGATCTT 216250 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 || ||||| || |||| ||| | | || ||| ||| ||||| || || || Sbjct 216249 TCTAAGGATCTTCACGACTGGCACAACCGCCTGAATGATGACGAGCGCTTCTTCATCTCT 216190 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198 | | | | ||||||||||| | |||||| || || |||||||| || ||| | || Sbjct 216189 CGCGTACTTGCCTTCTTTGCTGCCTCCGACGGCATTGTCAACGAAAACCTGCTCGAGCGT 216130 Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGAT 125257 ||| |||| || || || |||| ||| ||||| ||||| ||||| || ||||| Sbjct 216129 TTCAGCGGAGAGGTGCAGATCCCTGAGG-CTCGTTGCTTCTACGGTTTCCAGATTATGAT 216071 Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGA 125296 |||||| | ||| | || | |||||| |||||||| Sbjct 216070 CGAGAACATCCACGCTGAGACCTACTCTCTTCTGATTGA 216032 >seq28 Length=119586 Score = 89.7 bits (98), Expect = 8e-13 Identities = 213/318 (67%), Gaps = 8/318 (3%) Strand=Plus/Plus Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCACG 96865 || ||||| | ||| ||| | || || |||||| | ||| ||| || || || | Sbjct 113903 ACCAACGGTTCCTCCAATGGTATTGTTCCCATGCTCCGGGTGTTCAACAACACTGCCA-G 113961 Query 96866 ATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTG 96925 ||| || ||||| || || || || ||||| ||| | ||| | |||||||| ||||| Sbjct 113962 ATATGTAGACCAGGGAGGAAACAAGCGTCCAGGTGCTTTTGCCATTTACTTGGAGCCTTG 114021 Query 96926 GCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCA-- 96983 |||||| || || || || || |||| | ||||| ||| || | |||||| | Sbjct 114022 GCACGCCGATGTCTTCGAGTTCCTCGATCTCCGCAAGAACCACGG---TAAAGAGGAAGT 114078 Query 96984 -CGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAA 97042 ||||| | || | || ||||| |||||| || || |||||||||||||| || | Sbjct 114079 GAGAGCCCGCGATCTCTTCTATGCCCTCTGGACTCCGGACTTGTTCATGAAGCGAGTTGA 114138 Query 97043 CGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTG 97102 | | ||| |||||| || | || || || | | || || || ||||| | Sbjct 114139 AGCCAACGGCGACTGGACTCTCTTCTGTCCTAACGAGGCCCCTGGCTTGGCCGATGTTTA 114198 Query 97103 GGGCGAAGAGTTTGAGGC 97120 || || || |||||||| Sbjct 114199 TGGTGACGAATTTGAGGC 114216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741049946023240