Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576635.1_202016-02-26] 999 sequences; 35,835,174 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq891 190 3e-44 seq809 188 1e-43 >seq891 Length=6136 Score = 190 bits (210), Expect = 3e-44 Identities = 201/262 (77%), Gaps = 2/262 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||||| | || || |||||||| || ||||||||||| || | Sbjct 4880 CGCCAAGCGTCACCGCAAGATCT-TGCGTGACAACATCCAGGGTATCACCAAGCCCGCCA 4822 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||||||||| ||||| |||||||| ||||||||| |||| | || |||| || |||| Sbjct 4821 TCCGTCGTCTCGCTCGCCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTACGAGGAGA 4762 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 ||||| |||| | ||| |||||| || |||| || | |||||| | ||| |||| Sbjct 4761 CTCGTGGTGTTCTCAAGTCCTTCCTTGAGTCCGTCATTCGTGATGCCGTTACCTACACCG 4702 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || |||||||| |||||||| |||| | ||||| || | || || || | Sbjct 4701 AGCACGCCAAGCGTAAGACCGTCACCTCGCTGGACGTGGTCTACGCCCTCAAGCGCCAGG 4642 Query 16671 GCCGTAAGATTTATGGTTTTGG 16692 |||||| | || ||||| || Sbjct 4641 GCCGTACCCTCTACGGTTTCGG 4620 >seq809 Length=9377 Score = 188 bits (208), Expect = 1e-43 Identities = 192/248 (77%), Gaps = 2/248 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||||| | || || |||||||| || ||||| ||||| |||| Sbjct 5347 CGCCAAGCGTCACCGCAAGATCT-TGCGTGACAACATCCAGGGTATCACTAAGCCCGCTA 5405 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||||||||| |||||||||||||| ||||||||| |||||| || |||| || |||| Sbjct 5406 TCCGTCGTCTTGCTCGTCGTGGTGGTGTCAAGCGTATCTCTGCCATGATCTACGAGGAGA 5465 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 |||| ||| | |||| |||||| || || |||| ||| ||| || ||| || | Sbjct 5466 CCCGTGGTGTCCTCAAGACCTTCCTTGAGGGTGTCATCCGTGACGCTGTCACCTACACTG 5525 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || ||||| ||||| || | || |||||||||| | || ||||||| Sbjct 5526 AGCACGCCAAGCGCAAGACCGTCACTTCTCTTGACGTCGTCTATGCCCTCAAGCGTCAAG 5585 Query 16671 GCCGTAAG 16678 | ||| || Sbjct 5586 GACGTGAG 5593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074286607307