Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576635.1_202016-02-26] 999 sequences; 35,835,174 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq28 201 1e-46 >seq28 Length=119586 Score = 201 bits (222), Expect = 1e-46 Identities = 599/917 (65%), Gaps = 29/917 (3%) Strand=Plus/Minus Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197 || || ||||| || |||||| | |||| ||||| || | ||||| | | | | Sbjct 114213 TCAAATTCGTCACCATAAACATCGGCCAAGCCAGGGGCCTCGTTAGGACAGAAGAGAGTC 114154 Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 63256 || || |||| | | ||||| ||||| || | || ||| |||| || || ||| || Sbjct 114153 CAGTCGCCGTTGGCTTCAACTCGCTTCATGAACAAGTCCGGAGTCCAGAGGGC-ATAGAA 114095 Query 63257 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63316 ||||| | || ||| |||||| || || ||||| |||||||||||| | | Sbjct 114094 GAGATCGCGGGCTCTCACTTCCTCTTTACCGTGGTTCTTGCGGAGATCGAGGAACTCGAA 114035 Query 63317 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63376 | ||| | ||||| || |||||||| ||||| | | | || || || ||||||||||| Sbjct 114034 GACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCACCTGGACGCTTGTTTCCTCC 113975 Query 63377 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63436 ||| |||| ||||| || ||||| || | || | | ||| |||| |||||| || || Sbjct 113974 CTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATGGGAACAATACCATTGGA 113915 Query 63437 TATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGA 63494 ||| |||||||| || ||| || | ||||| || | | |||| ||| Sbjct 113914 GGAACCGTTGGTACCACCAATGTAGGAGCCGGTAGCACGGATGCGGTGCACATTG--AGA 113857 Query 63495 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCC 63554 || ||||| || || | || ||||| ||||| ||| || | ||||||||| ||||| Sbjct 113856 CCGATTCCACCAGCGGTCTTCGAGATCAATGCACATGTCTTGAGCGTGTCATAAATACCT 113797 Query 63555 TCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 63614 || |||||||| || |||| | | ||||| || || | || | || || Sbjct 113796 TCGATGCTATCCTCCTTCATATCGACAAGAAAGCATGAAGCAAGCTGAGGCTGAGGGGTA 113737 Query 63615 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 63674 || ||||| || || || || || || || || || | || | ||| | | | || Sbjct 113736 CCAGCATTGAACAAAGTCGGCGAGGCATGGGTGAAATACTTCTGAGACATCAAGTGATAG 113677 Query 63675 GTCTCAATAGCTGAGTCTATATCCCATT--GATGAATTCCTACTGCGACACGCATTAACA 63732 ||||| ||||| ||| || |||| |||||| || || | ||||||||| || | Sbjct 113676 GTCTCGATAGC--CTTCTCAATGTCATTACCATGAATACCAACAGAGACACGCATCAAAA 113619 Query 63733 TGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTT-------- 63784 ||||||||| | |||| | | ||| | | |||| | | |||| Sbjct 113618 GGTGCTGAGGACGTTCAGCAACCTT----TCCA---TCAATCCGARGYATTTATGACACG 113566 Query 63785 TTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACC 63842 || | ||| || || || ||| ||||||| ||||| || || ||||| | |||| | Sbjct 113565 CTCAAGAGTCTTGAAGCCGAAAAAGTTGTAGTTGAAA--TCGCGGTCGTACACAATAGCG 113508 Query 63843 GAGTTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACTTGAAATAATCGGA 63902 |||||||||| || || ||| | ||||| || || |||| || || || Sbjct 113507 GAGTTGAGTTCGTCGGCATGTTTCATGACTATCTCGTACGTTTCCTTTGATATCATTGGG 113448 Query 63903 GAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAAT 63962 | | ||||| ||| || || || | || | | ||| || || || ||| Sbjct 113447 GCAGGTTTCTTATTCTTTGGGTTGATGTAATGGTATAGGTCTGAAATAACCAGGGAGAAT 113388 Query 63963 AGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAA 64022 | || ||||||| || || || || || || ||||| | || || |||||||| || Sbjct 113387 TGCTTCTTTGTTTGCTARTGAAGGTTCGAAACAGCTATACGAGCAGCAAGAATGGCGTAG 113328 Query 64023 TCCGGATGTTGTGTAGT 64039 || |||||| ||||| Sbjct 113327 TCTGGATGTGTGGTAGT 113311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622939420946840