Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576635.1_202016-02-26] 999 sequences; 35,835,174 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq3 205 2e-47 seq28 132 9e-26 >seq3 Length=232150 Score = 205 bits (226), Expect = 2e-47 Identities = 350/504 (69%), Gaps = 9/504 (2%) Strand=Plus/Minus Query 42645 AAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGG 42704 |||||||| |||||||| || ||||||| || || || | || ||||| || | Sbjct 215909 AAGAAGGCTGACTGGGCTATCCGCTGGATCCAGGATCAGGAGTCGACCTTCGGTCAGCGT 215850 Query 42705 CTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTC 42764 || || ||||| |||| || ||||| ||||||||||| || |||||||||| |||||| Sbjct 215849 CTCGTGGCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCCGGATCCTTCGCCTCTATCTTC 215790 Query 42765 TGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGG 42824 ||||| ||| || | | ||||||||| || || ||||| ||||| || ||| | Sbjct 215789 TGGCTGAAGAAGCGTGGCTTGATGCCCGGTCTTACATTCTCCAACGAGCTTATCTCTCGT 215730 Query 42825 GACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAG 42884 || ||||| || || | |||||||| ||||| || |||||| ||||| | |||| Sbjct 215729 GATGAGGGTCTCCACACTGACTTTGCTTGCCTGCTCTTCTCG---CACCT---GAACAAC 215676 Query 42885 C-CCTCGA--AGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAG 42941 | || ||| || || || | | ||| ||| || || || ||||||||| Sbjct 215675 CGCCCCGACCCTCAGATTGTGGAGGACGTTATCGTGGAAGCTGTCTCCATTGAGAAGGAG 215616 Query 42942 TTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAG 43001 ||||| || | | || || | || | ||||||||| | || | |||||| || Sbjct 215615 TTCCTGACTGACGCTCTTCCTTGCGCTCTTCTTGGCATGAACTCCAACTTGATGTGCCAG 215556 Query 43002 TACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGCCTCTACAAC 43061 ||||| ||| ||||||||||| ||||||| | | || || | || ||| Sbjct 215555 TACATTGAGTTCGTCGCCGACCGTCTCCTGGTCGCTCTTGGCAACAACAAGTACTTCAAT 215496 Query 43062 ACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTC 43121 | | ||| || ||||| ||||| |||||||| ||| || ||||||||||| ||| Sbjct 215495 GCCACCAACCCATTTGACTTCATGGACAACATCTCCCTGGCCGGTAAGACCAACTTCTTC 215436 Query 43122 GAGAAGCGCGTCGCCGACTACCAG 43145 |||||||| |||| || |||||| Sbjct 215435 GAGAAGCGTGTCGGTGATTACCAG 215412 Score = 111 bits (122), Expect = 3e-19 Identities = 182/259 (70%), Gaps = 5/259 (2%) Strand=Plus/Minus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || ||| ||||||||||||||| ||||| || Sbjct 216309 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAAATTGATCTT 216250 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGA--GA--ACGAAAAGTTTTTCCTCAA 42415 | ||||| || |||| | || | |||| || |||| || ||| || Sbjct 216249 TCTAAGGATCTTCACGACTGGCACA-ACCGCCTGAATGATGACGAGCGCTTCTTCATCTC 216191 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 | |||| |||||||| || ||||| |||||||| ||||| || |||||| | | Sbjct 216190 TCGCGTACTTGCCTTCTTTGCTGCCTCCGACGGCATTGTCAACGAAAACCTGCTCGAGCG 216131 Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535 |||| |||||||||| | |||||| || ||||||||||| |||||||| || Sbjct 216130 TTTCAGCGGAGAGGTGCAGATCCCTGAGGCTCGTTGCTTCTACGGTTTCCAGATTATGAT 216071 Query 42536 AGAGAACGTGCACTCTGAG 42554 |||||| | ||| ||||| Sbjct 216070 CGAGAACATCCACGCTGAG 216052 >seq28 Length=119586 Score = 132 bits (146), Expect = 9e-26 Identities = 318/474 (67%), Gaps = 8/474 (2%) Strand=Plus/Minus Query 244970 GGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATC 245029 || || | |||| |||| |||||| | | | || | || |||||| | ||| || || Sbjct 114168 GGACAGAAGAGAGTCCAGTCGCCGTTGGCTTCAACTCGCTTCATGAACAAGTCCGGAGTC 114109 Query 245030 CAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGC 245089 |||||||| | |||||| || | || ||| || || || |||||| | || Sbjct 114108 CAGAGGGCATAGAAGAGATCGCGGGCTCTCACTTCCTCTTTACCGTGGTTCTTGCGGAGA 114049 Query 245090 TCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGC 245149 || | || || ||||| ||| ||||||| ||||||| ||| | || | || || || Sbjct 114048 TCGAGGAACTCGAAGACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCACCTGGA 113989 Query 245150 CGCTTGTTGCCTCCCTGGTCCACCATCCTCTCG-AGCG-CGTTGAAGATGCGCAGGGTAG 245207 |||||||| ||||||||||| | ||| ||| | || | |||||| | || || | | Sbjct 113988 CGCTTGTTTCCTCCCTGGTCTA-CAT-ATCTGGCAGTGTTGTTGAACACCCGGAGCATGG 113931 Query 245208 GCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGA--G 245265 | || || || || ||| |||||||| || ||||||| ||| | | | || Sbjct 113930 GAACAATACCATTGGAGGAACCGTTGGTACCACCAATGTAGGAGCCGGTAGCACGGATGC 113871 Query 245266 GTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGAT 245325 | ||| || || | || | ||| || ||| ||| ||||| | || || |||||| Sbjct 113870 GGTGCACATTGAGA--CCGATTCCACCAGCGGTCTTCGAGATCAATGCACATGTCTTGAG 113813 Query 245326 GGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAG 245385 ||||| || || || ||||| ||| |||||| | || |||||||| || | || Sbjct 113812 CGTGTCATAAATACCTTCGATGCTATCCTCCTTCATATCGACAAGAAAGCATGAAGCAAG 113753 Query 245386 CTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTA 245439 ||| |||| ||| | | | ||||||| ||| || ||| ||||| || || Sbjct 113752 CTGAGGCTGAGGGGTACCAGCATTGAACAAAGTCGGCGAGGCATGGGTGAAATA 113699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944327407564240