Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576635.1_202016-02-26] 999 sequences; 35,835,174 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq28 116 4e-21 >seq28 Length=119586 Score = 116 bits (128), Expect = 4e-21 Identities = 403/622 (65%), Gaps = 10/622 (2%) Strand=Plus/Minus Query 48125 CTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGA 48184 ||||||||| || ||||| |||| | || ||||| || |||||||| | | | Sbjct 114214 CTCAAATTCGTCACCATAAACATCGGCCAAGCCAGGGGCCTCGTTAGGACAGAAGAGAGT 114155 Query 48185 CCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATA-A 48243 ||| || | | || |||| |||| || | || || |||| || || ||| | Sbjct 114154 CCAGTCGCCGTTGGCTTCAACTCGCTTCATGAACAAGTCCGGAGTCCAGAGGGC-ATAGA 114096 Query 48244 ATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCA 48303 | | ||| | | ||| | ||| || || || ||| | || || || || || | Sbjct 114095 AGAGATCGCGGGCTCTCACTTCCTCTTTACCGTGGTTCTTGCGGAGATCGAGGAACTCGA 114036 Query 48304 TTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTC 48363 | ||| || ||||| || || || || || || | ||||||| || || || |||| Sbjct 114035 AGACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCACCTGGACGCTTGTTTCCTC 113976 Query 48364 CTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTG 48423 | || |||| |||||||||||| ||||| | || | | ||| || ||||||||||| | Sbjct 113975 CCTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATGGGAACAATACCATTGG 113916 Query 48424 ATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTAT--ATTACTAATTGAAAT 48481 | ||| ||||| || ||| || || |||| | || | | |||| | Sbjct 113915 AGGAACCGTTGGTACCACCAATGTAGGAGCCGGTAGCACGGATGCGGTGCACATTG--AG 113858 Query 48482 ACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCC 48541 ||| || ||||| || | || || || | ||||| || || || |||||||| || Sbjct 113857 ACCGATTCCACCAGCGGTCTTCGAGATCAATGCACATGTCTTGAGCGTGTCATAAATACC 113798 Query 48542 TTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGT 48601 ||| || ||||| || |||||| | ||||| || || | || || ||| || Sbjct 113797 TTCGATGCTATCCTCCTTCATATCGACAAGAAAGCATGAAGCAAGCTGAGGCTGAGGGGT 113738 Query 48602 TCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATA 48661 || | ||| || || || || || ||||| | || | |||| || | ||| | ||| Sbjct 113737 ACCAGCATTGAACAAAGTCGGCGAGGCATGGGTGAAATACTTCTGAGACATCAAGTGATA 113678 Query 48662 TGTTTCAATAACAGAATCTATATCCCATT--GATGTATACCTATAGATACACGCATTAAC 48719 || || ||| | ||| || |||| ||| ||||| | ||| |||||||| || Sbjct 113677 GGTCTCGATAGC--CTTCTCAATGTCATTACCATGAATACCAACAGAGACACGCATCAAA 113620 Query 48720 ATATATTGAGGTCTTTCAACAA 48741 | | ||||| | |||| ||| Sbjct 113619 AGGTGCTGAGGACGTTCAGCAA 113598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562101780666360