Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576635.1_202016-02-26] 999 sequences; 35,835,174 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq487 123 2e-23 >seq487 Length=25835 Score = 123 bits (136), Expect = 2e-23 Identities = 404/628 (64%), Gaps = 21/628 (3%) Strand=Plus/Minus Query 29777 TGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGT 29836 ||||||||||| | ||||| || || || || || || ||||||||||| || | | Sbjct 2730 TGGGCTCCCTCACCAGCTGCTCCTGCAAGGGCTCGACATGGTCCAGGTAGACATGGGTAT 2671 Query 29837 CTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACG 29896 | |||| || || ||||| || || | || | | ||||| ||||| | | Sbjct 2670 CACCCATGGCATGAACAAAGGTACCGGGATGCAGGTCCACAGCATGAGCAATCATATGGG 2611 Query 29897 TGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCT 29956 | | ||| | |||| ||| || || || || || ||||| | | ||| | ||| | || Sbjct 2610 TCAAGAGGGCGTAGGAGGCAATATTGAACGGCACGCCGAGGGCGACGTCACACGAGCGCT 2551 Query 29957 GGTAGAGCTGACAC--GAGA----------GCTCT---CC------GTCGCTCACGTAAA 29995 |||||||||| || |||| | ||| || || | ||||| | Sbjct 2550 GGTAGAGCTGGCAGTGGAGATGACCCTTCTGGTCTTGGCCATTGGGGTAGGAGACGTAGA 2491 Query 29996 ACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGG 30055 |||| | | || || || || || ||||| | || ||||||||||| Sbjct 2490 ACTGGGCGAACATATGACAAGGCGGGAGGGCCATCTTCTTGAGATCGGCGGGGTTCCAGG 2431 Query 30056 CGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCA 30115 ||| || ||||||||| | ||| ||||| ||| | | || |||| | | | Sbjct 2430 CGCTCATGATGATGCGGCGGTCGAAGGGGTTATTCTTCAGCTTGTGCACGACCTCGGCGA 2371 Query 30116 GCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAAT 30175 |||| || || || |||| |||||| | | ||| |||||| || ||||| | Sbjct 2370 GCTGGTCAACGCCTTGTCCCGTGTAGTCGGTTTTGGCGTCGACGTACTCGGCCCCGAAGT 2311 Query 30176 GCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCC 30235 | | ||| |||||||||||||| || ||||| || || | || | ||| || | ||| Sbjct 2310 GGCGCCATTGGAACCCGTACACGGGACCCAGATCGCCGACCTCGCGGTGGTCCAGGCCGA 2251 Query 30236 TCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGA 30295 |||||| | || || | | |||||| ||||||||||||| || || | ||||||| Sbjct 2250 CCTTGTCGAGGAACTCACGGCTGCCGTTGCCGTCCCAGATCTTGACGCCTTGGTCGGAGA 2191 Query 30296 GCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCC 30355 || ||| ||| | || || |||||| ||| | || | |||||||| Sbjct 2190 GCGGCAGGGATGAGGTGCAGCCGGAGATGAACCAGAGCTGTTCGGCGACGACGGCGCGGA 2131 Query 30356 AAAAGACCCTCTTGGTCGTGAGGAGGGG 30383 ||||| | |||||| || |||||||| Sbjct 2130 GGAAGACGCGCTTGGTGGTCAGGAGGGG 2103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408612624953027