Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576635.1_202016-02-26] 999 sequences; 35,835,174 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq3 107 4e-18 >seq3 Length=232150 Score = 107 bits (118), Expect = 4e-18 Identities = 288/446 (65%), Gaps = 5/446 (1%) Strand=Plus/Minus Query 25877 AGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCA 25936 |||| || || ||||| || ||||| ||||| ||||| ||| ||| || || || | | Sbjct 215854 AGCGTCTCGTGGCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCCGGATCCTTCGCCTCTA 215795 Query 25937 TCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATC 25995 |||||||||| ||| || || |||||||| || ||| || ||||||||||| ||| Sbjct 215794 TCTTCTGGCTGAAGAAGCGTGGCTTGATGCCCGGTCT-TACATTCTCCAACGAGCTTATC 215736 Query 25996 AGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTC 26055 | || ||||||||||||| || ||||| |||||||||| | || ||| || | Sbjct 215735 TCTCGTGATGAGGGTCTCCACACTGACTTTGCTTGCCTGCTCTTCTCG---CACCTGAAC 215679 Query 26056 CACAAACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAG 26115 || || | ||| || | | ||| || ||||| || |||||| Sbjct 215678 AACCGCCCCGACCCTCAGATTGTGGAGGACGTTATCGTGGAAGCTGTCTCCATTGAGAAG 215619 Query 26116 GAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGC 26175 ||||| | | ||||||||| || | ||| || Sbjct 215618 GAGTTCCTGACTGACGCTCTTCCTTGCGCTCTTCTTGGCATGAACTCCAACTTGATGTGC 215559 Query 26176 CAATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTAC 26235 || |||||||||| || ||||||| ||| ||| | || || | || || | Sbjct 215558 CAGTACATTGAGTTCGTCGCCGACCGTCTCCTGGTCGCTCTTGGCAACAACAAGTACTTC 215499 Query 26236 AGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTC 26295 | | | | ||||| || ||||| ||||| ||||| || ||| || |||||||||||| Sbjct 215498 AATGCCACCAACCCATTTGACTTCATGGACAACATCTCCCTGGCCGGTAAGACCAACTTC 215439 Query 26296 TTTGAAAAGAGGGTCGGCGACTATCA 26321 || || ||| | ||||| || || || Sbjct 215438 TTCGAGAAGCGTGTCGGTGATTACCA 215413 Score = 93.3 bits (102), Expect = 8e-14 Identities = 179/260 (69%), Gaps = 7/260 (3%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| | ||| |||||||||||| || |||||||| Sbjct 216309 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAAATTGATCTT 216250 Query 25537 GCCAAGGACATGGACGGCTGGTAC----GCTCTATCCAAAGACGAGCAGCATTTTC-TCA 25591 | ||||| | ||| |||| || || || | ||||||| || | ||| || Sbjct 216249 TCTAAGGATCTTCACGACTGGCACAACCGC-CTGAATGATGACGAGC-GCTTCTTCATCT 216192 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651 ||| | || |||||||| ||||| || || || || ||||| || ||| |||| Sbjct 216191 CTCGCGTACTTGCCTTCTTTGCTGCCTCCGACGGCATTGTCAACGAAAACCTGCTCGAGC 216132 Query 25652 GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCA 25711 | |||| | | || |||||| | ||||| || ||||||||||||||||| | Sbjct 216131 GTTTCAGCGGAGAGGTGCAGATCCCTGAGGCTCGTTGCTTCTACGGTTTCCAGATTATGA 216072 Query 25712 TCGAAAATGTGCACTCTGAG 25731 |||| || | ||| ||||| Sbjct 216071 TCGAGAACATCCACGCTGAG 216052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928833201050560