Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576635.1_202016-02-26] 999 sequences; 35,835,174 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq76 132 6e-25 seq208 109 7e-18 seq3 98.7 1e-14 seq28 91.5 2e-12 >seq76 Length=89387 Score = 132 bits (146), Expect = 6e-25 Identities = 112/138 (81%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||||||||||||||| || ||||||||| ||||||||||| | || ||||||||| Sbjct 6067 GACAGCATCGGCGGCACCGTAACGTGCGTGATCCGCAACGTGCCCGTCGGACTCGGCGAG 6008 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| |||||| |||| ||| |||||| ||||||||||| ||||| || || Sbjct 6007 CCCTGCTTCGACAAGCTCGAAGCCAAGCTCGCGCACGCCATGCTCAGCATCCCCGCAACA 5948 Query 19167 AAGGGATTCGAGATTGGC 19184 ||||| ||||| || ||| Sbjct 5947 AAGGGCTTCGAAATCGGC 5930 >seq208 Length=55775 Score = 109 bits (120), Expect = 7e-18 Identities = 93/115 (81%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 |||||||||||||| ||||| ||| || || ||| |||| |||||| | || || || Sbjct 33963 GCCGCCAACTACCTTGACATTAAGGGACTACTTGATGTTGGCTGCAAGACCGTTGCGAAT 34022 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||||||||| || |||||||| || |||||||| || ||| || ||| Sbjct 34023 ATGATCAAGGGCAAGTCTCCTGAGGAGATTCGTAAGACCTTCAATATCCAGAACG 34077 >seq3 Length=232150 Score = 98.7 bits (108), Expect = 1e-14 Identities = 165/235 (70%), Gaps = 8/235 (3%) Strand=Plus/Plus Query 868699 GTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 868758 ||| || || || ||| |||||| ||||||||||| || | || ||||| ||||| Sbjct 215415 GTAATCACCGACACGCTTCTCGAAGAAGTTGGTCTTACCGGCCAGGGAGATGTTGTCCAT 215474 Query 868759 CCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCC--GAGCGACGCGAGCAGG 868816 | || ||||||| | ||| ||| ||| | | || |||||| | || || Sbjct 215475 GAAGTCAAATGGGTTGGTGGCATTGAAGTACTTGTTGTTGCCAAGAGCGA--CCAGGAGA 215532 Query 868817 CGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCC--GATGAGCG 868874 ||||||||||| ||||| |||||||||||||| | | || ||||||||| || ||||| Sbjct 215533 CGGTCGGCGACGAACTCAATGTACTGGCACATCAAGTTGGAGTTCATGCCAAGAAGAGCG 215592 Query 868875 CCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGAT 868929 | | || || | || ||| ||||| ||||| || ||| || || ||||| Sbjct 215593 CAA--GGAAGAGCGTCAGTCAGGAACTCCTTCTCAATGGAGACAGCTTCCACGAT 215645 >seq28 Length=119586 Score = 91.5 bits (100), Expect = 2e-12 Identities = 195/289 (67%), Gaps = 2/289 (1%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||| || || | || |||| ||| || || ||||||||||| || | || ||||| Sbjct 113974 CTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATGGGAACAATACCATTGGA 113915 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 |||||||| || | | ||||| ||||| || || | |||| | | || Sbjct 113914 GGAACCGTTGGTACCACCAATGTAGGAGCCGGTAGCACGGATGCGGTGCACATTGAGACC 113855 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGT-TTGAGCGTGTCGTAGATGCCCT 1630243 ||| || || || | ||| ||||| | || || ||| ||||||||||| || || || | Sbjct 113854 GATTCCACCAGCGGTCTTCGAGATCAATGCACA-TGTCTTGAGCGTGTCATAAATACCTT 113796 Query 1630244 CGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGC 1630303 |||| || ||||||| || || |||||||| || | || || || | || | Sbjct 113795 CGATGCTATCCTCCTTCATATCGACAAGAAAGCATGAAGCAAGCTGAGGCTGAGGGGTAC 113736 Query 1630304 CGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACAT 1630352 | || ||||| | || |||| || |||||| ||| | | ||||| Sbjct 113735 CAGCATTGAACAAAGTCGGCGAGGCATGGGTGAAATACTTCTGAGACAT 113687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107057217381683