Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576635.1_202016-02-26] 999 sequences; 35,835,174 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq3 116 5e-21 seq28 109 7e-19 >seq3 Length=232150 Score = 116 bits (128), Expect = 5e-21 Identities = 281/422 (67%), Gaps = 10/422 (2%) Strand=Plus/Plus Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430 || || ||||| |||||||| |||||||||||||| || | ||| ||||| ||||| Sbjct 215416 TAATCACCGACACGCTTCTCGAAGAAGTTGGTCTTACCGGCCAGGGAGATGTTGTCCATG 215475 Query 122431 AAGTCAAATGGATTCTTCGCGTTCCA--AATGGGTGGCACCCCAACTTGTTTGAGGAGAC 122488 ||||||||||| || | || || | | | | || || || ||||||| Sbjct 215476 AAGTCAAATGGGTTGGTGGCATTGAAGTACTTGTTGTTGCC--AAGAGCGACCAGGAGAC 215533 Query 122489 GATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 122548 | || | || |||||||||||| | ||||| | |||||||| || | || | Sbjct 215534 GGTCGGCGACGAACTCAATGTACTGGCACATCAAGTTGGAGTTCATGCCAAGAAGAGCGC 215593 Query 122549 ATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGT 122608 | || || ||||| | |||| | |||||||| || || || |||||| ||| Sbjct 215594 AAGGAAGAGCGTCAGTCAGGAACTCCTTCTCAATGGAGACAGCTTC---CACGATAACGT 215650 Query 122609 GG---ATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAACT 122665 | | | | | ||| | || || | ||||||| ||||| | Sbjct 215651 CCTCCACAATCTGAGGGTCGGGGCGGTTGTTCAGGTGCGAGAAGAGCAGGCAAGCAAAGT 215710 Query 122666 CCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGA 122725 | ||||||||||||||| || || ||||| || || ||||| ||||| ||||| | Sbjct 215711 CAGTGTGGAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAATGTAAGACCGGGCATCA 215770 Query 122726 GACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCA 122785 || |||||||||| ||| | |||| | ||| || |||||||||||||||||||| | Sbjct 215771 AGCCACGCTTCTTCAGCCAGAAGATAGAGGCGAAGGATCCGGAGAAGAAGATACCCTCAA 215830 Query 122786 CA 122787 || Sbjct 215831 CA 215832 >seq28 Length=119586 Score = 109 bits (120), Expect = 7e-19 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 || ||||| | || || | ||||| ||||| ||||||| | | |||||||| | Sbjct 114520 GGCAGGGCAAGAGAGGCAAGGTTGCAGACAGCAACCTCATCCGGAGCAGTGTACTCAATG 114461 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 ||||| ||||| | |||||| || ||||| |||| ||||| ||||| ||||| || Sbjct 114460 ATTTCAGTACAGAGGTTGGAGCTGCGGATCGTTCCCAGGTTCTTCTGGTTGCTCTTTCTG 114401 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409 || || ||||||||||| |||||| | || | || ||||| ||||| | | |||||| Sbjct 114400 TTACAGGCATCCTTGTACAGCATGAAAGGATTTCCAGTCTCGGTCTGAGCCTCCAGAATA 114341 Query 111410 GCCTTCCA 111417 || | ||| Sbjct 114340 GCATACCA 114333 Score = 84.2 bits (92), Expect = 3e-11 Identities = 203/307 (66%), Gaps = 9/307 (3%) Strand=Plus/Minus Query 111473 TAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAG 111532 ||||| || ||||| || ||||| | |||| | || || |||| || |||||| Sbjct 114222 TAGAGTGCCTCAAATTCGTCACCATAAACATCGGCCAAGCCAGGGGCCTCGTTAGGACAG 114163 Query 111533 AAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGG 111592 || |||| ||| | || | ||||| ||||||||||| | ||| ||| |||| ||| Sbjct 114162 AAGAGAGTCCAGTCGCCGTTGGCTTCAACTCGCTTCATGAACAAGTCCGGAGTCCAGAGG 114103 Query 111593 GATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGG 111652 | | |||||||| | | | || || | ||| ||||| || | || ||| Sbjct 114102 GCATAGAAGAGATCGCGGGCTCTCACTTCCTCTTTACCGTGGTTCTTGCGGAGATCGAGG 114043 Query 111653 AACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC 111712 ||||| | || ||| |||||||| ||||| | || | || | || || | ||||| Sbjct 114042 AACTCGAAGACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCACC---TGGACGC 113986 Query 111713 ------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATA 111766 || | || | |||||| | || ||| ||| || || || ||||| |||| | Sbjct 113985 TTGTTTCCTCCCTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATGGGAACA 113926 Query 111767 ATACCAT 111773 ||||||| Sbjct 113925 ATACCAT 113919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628024157450400