Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576635.1_202016-02-26] 999 sequences; 35,835,174 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq3 170 2e-37 seq70 154 2e-32 seq51 132 5e-26 seq510 111 2e-19 seq28 111 2e-19 >seq3 Length=232150 Score = 170 bits (188), Expect = 2e-37 Identities = 346/508 (68%), Gaps = 27/508 (5%) Strand=Plus/Minus Query 64662 TAAAAAGGCTGAATGGGCCATCCGGTGGAT---GAATCGTGGGTCGTCGTTTGGTCAGCG 64718 ||| |||||||| ||||| ||||| ||||| | ||| | |||| | || |||||||| Sbjct 215910 TAAGAAGGCTGACTGGGCTATCCGCTGGATCCAGGATCAGGAGTCGACCTTCGGTCAGCG 215851 Query 64719 TCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTT 64778 ||||| || || ||| ||| || || || ||||| || || || ||| ||||| || Sbjct 215850 TCTCGTGGCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCCGGATCCTTCGCCTCTATCTT 215791 Query 64779 CTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCG 64838 |||||| || ||||| ||| ||||||| ||||| | || || |||||||| |||||||| Sbjct 215790 CTGGCTGAAGAAGCGTGGCTTGATGCCCGGTCTTACATTCTCCAACGAGCTTATCTCTCG 215731 Query 64839 GGACGAGGGGCTCCACCAAGAATTTGCGGTTACC--CTGTTCAGCCACCTCAA-----GG 64891 || ||||| |||||| || ||||| || || || ||| ||||| || | Sbjct 215730 TGATGAGGGTCTCCACACTGACTTTGC--TTGCCTGCTCTTCTCGCACCTGAACAACCGC 215673 Query 64892 ACAAACCATCACAT--GGGACTATAATTGATATAGTAAAATCGGCTGTAGAAATTGAAAA 64949 | ||| ||| || ||| | | ||| || || ||||| ||||| || Sbjct 215672 CCCGACCCTCAGATTGTGGAGGA----CGTTATCGTGGAA---GCTGTCTCCATTGAGAA 215620 Query 64950 GGAATTCATTACTGCCGCGCTTCCGTGTCGTCTCATCGGCATGGATGCCGATAAGATGAA 65009 ||| ||| | |||| ||| ||||| || ||| | |||||| | || | |||| Sbjct 215619 GGAGTTCCTGACTGACGCTCTTCCTTGCGCTCTTCTTGGCATGAACTCCAACTTGATGTG 215560 Query 65010 ACAGTATATCGAATTTGTAGCAGA---TCGCCTGCTTACTCAGTTTGGTATTAAGCCCTA 65066 ||||| || || || || || || || |||| | ||| |||| | || || Sbjct 215559 CCAGTACATTGAGTTCGTCGCCGACCGTCTCCTGGTCGCTC---TTGGCAACAACAAGTA 215503 Query 65067 CTGGAATTCTTCAAATCCATTTGACTGGATGGAGACGATCAGCCTGGAGGGGAAGACTAA 65126 || ||| | | || |||||||||| ||||| | ||| ||||| || ||||| || Sbjct 215502 CTTCAATGCCACCAACCCATTTGACTTCATGGACAACATCTCCCTGGCCGGTAAGACCAA 215443 Query 65127 CTTTTTTGAAAAGAGGGTAGGTGATTAC 65154 ||| || || ||| | || ||||||||| Sbjct 215442 CTTCTTCGAGAAGCGTGTCGGTGATTAC 215415 >seq70 Length=91386 Score = 154 bits (170), Expect = 2e-32 Identities = 163/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477 || ||||| || || || |||||||| || ||||||||||||||| | |||| ||| | Sbjct 61841 GTGAAGACCCTCACTGGAAAGACTATCACCCTTGAGGTTGAGTCAAGCGATACCATCGAC 61900 Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 || | ||| ||||| |||||||| || || ||||| || |||||||||||| | || Sbjct 61901 AACGTTAAGAGCAAAATCCAGGACAAAGAAGGCATTCCCCCCGACCAGCAGCGTTTGATC 61960 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597 || ||||||||||| |||||||| | |||||| || | ||||| || | || |||||| Sbjct 61961 TTCGCTGGTAAGCAGCTCGAGGACGGTCGTACTCTGTCGGACTACAACATTCAGAAGGAA 62020 Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || ||||| || | || |||| | || ||||| Sbjct 62021 TCTACTCTCCACTTGGTTCTGCGCTTGCGTGGTGG 62055 Score = 149 bits (164), Expect = 7e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| || ||||| ||||| ||||| || |||||||| ||| Sbjct 62057 ATGCAGATTTTCGTCAAGACTCTCACCGGAAAGACAATTACGCTGGAGGTTGAATCATCC 62116 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| ||||| | || ||||| || || |||||||||||||| |||||| Sbjct 62117 GACACGATCGATAATGTGAAGTCAAAGATTCAAGATAAAGAGGGAATTCCTCCTGACCAG 62176 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| ||||| || || ||||| ||||| |||| || || | | || || || Sbjct 62177 CAGCGTCTCATTTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACTTTGTCCGATTACAAC 62236 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || || || || | || | ||| | |||||||| ||||| Sbjct 62237 ATCCAGAAAGAGTCTACATTGCACTTGGTCCTCCGTCTTCGTGGTGG 62283 Score = 147 bits (162), Expect = 2e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 27428 TTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGG 27487 ||||||||||||| || ||| | ||||| ||||| | || | || | || | ||| Sbjct 61549 TTACCGGCAAGACCATCACTTTGGAGGTCGAGTCGAGCGACACTATCGACAACGTCAAGA 61608 Query 27488 CTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTA 27547 || |||||||| ||||| || |||||||| ||||||||||| || || || ||||| | Sbjct 61609 GCAAGATTCAGGATAAGGAAGGCATTCCTCCTGACCAGCAGCGCCTGATCTTCGCTGGCA 61668 Query 27548 AGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTC 27607 |||| || ||||||| |||||||| | |||||||| |||| ||||| ||||| || | Sbjct 61669 AGCAGCTTGAGGATGGCCGTACCCTCTCTGACTATAACATCCAGAAGGAGTCCACCCTCC 61728 Query 27608 ATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | || || | ||||| || |||||| Sbjct 61729 ACCTTGTTCTTCGTCTCCGTGGTGGA 61754 Score = 143 bits (158), Expect = 3e-29 Identities = 171/230 (74%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || |||||||| || ||||||||||| ||| | || ||||| || | Sbjct 62285 ATGCAGATCTTCGTTAAGACGCTCACTGGCAAGACTATCACTTTGGAAGTTGAA--AGCT 62342 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | || | || | ||| | || || || ||||||||||| ||||| ||||||| Sbjct 62343 CGGACACTATCGACAACGTCAAGTCAAAGATCCAAGACAAGGAGGGTATTCCCCCAGACC 62402 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||| ||||| || |||||||| ||||| || ||||||| || || || ||||||| | Sbjct 62403 AGCAACGTCTTATCTTTGCTGGCAAGCAGCTAGAGGATGGACGCACGCTCTCAGACTACA 62462 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 || | || ||||| ||| | || | ||| ||||||| || |||||| Sbjct 62463 ATATTCAGAAGGAGAGCACCTTACACTTGGTCCTGCGTCTCCGTGGTGGA 62512 >seq51 Length=97269 Score = 132 bits (146), Expect = 5e-26 Identities = 142/185 (77%), Gaps = 2/185 (1%) Strand=Plus/Minus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || |||||||| || || || ||||| ||||| || || |||||||| | || | ||| Sbjct 43922 TTCGTCAAGACCCTCACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGCGACACCATC 43863 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | || | ||||| || || |||||||||||||| || || || |||||||||||||| Sbjct 43862 GACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCTG 43803 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAA 27593 || || || |||||||| || ||||||| || ||||| ||| ||||| || |||| || Sbjct 43802 ATCTTCGCCGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGC-GACTACAACATCCAGAA 43744 Query 27594 GGAAT 27598 || || Sbjct 43743 GGTAT 43739 >seq510 Length=24253 Score = 111 bits (122), Expect = 2e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 |||||||||||||| || || |||||||||||||| || || ||||| ||||| |||||| Sbjct 13606 GACAAGGAGGGAATCCCCCCTGACCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTCGAG 13547 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 || | ||||| || | ||||| || |||| ||||| ||||| ||||| || || | Sbjct 13546 GACGGCCGTACTCTTTCTGACTACAACATCCAGAAGGAGTCCACCCTTCACCTCGTGCTC 13487 Query 27619 CGTCTTCGCGGTGG 27632 || || || ||||| Sbjct 13486 CGCCTGCGTGGTGG 13473 >seq28 Length=119586 Score = 111 bits (122), Expect = 2e-19 Identities = 377/578 (65%), Gaps = 16/578 (3%) Strand=Plus/Minus Query 81181 GGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAA 81240 |||| ||||||||| || | || ||||||| || | || || ||||||||| Sbjct 114179 GGGC-CTCGTTAGGACAGAAGAGAGTCCAGTCGCCGTTGGCTTCAACTCGCTTCATGAAC 114121 Query 81241 GCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGG 81300 ||| || |||||||||| ||| || |||||| | | | ||||| | ||| ||| Sbjct 114120 AAGTCCGGAGTCCAGAGGGCATAGAAGAGATCGCGGGCTCTCACTTCCTCTTTACCGTGG 114061 Query 81301 TTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCG 81360 || ||| | ||||| || || | || || || ||||| ||||||| || | ||| Sbjct 114060 TTCTTGCGGAGATCGAGGAACTCGAAGACATCGGCGTGCCAAGGCTCCAAGTAAATGGCA 114001 Query 81361 ATCGACCCCTTG-CGACGG---CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATAC 81416 | | | ||| | || | || ||||||| || || | |||||| ||| || || Sbjct 114000 AAAG-CACCTGGACGCTTGTTTCCTCCCTGGTCTACATATCTGGCAGTGTTGTTGAACAC 113942 Query 81417 ACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTT 81476 || | ||| || | ||||||| || |||||| ||||| | || || || | Sbjct 113941 CCGGAGCATGGGAACAATACCATTGGAGGAACCGTTGGTACCACCAATGTAGGAGCCGGT 113882 Query 81477 GGCGCGCA--CCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCA 81534 || || | | ||| ||||| ||||||| ||||| | ||| || ||| ||| Sbjct 113881 AGCACGGATGCGGTGCACATTGA--GACCGATTCCACCAGCGGTCTTCGAGATCAATGCA 113824 Query 81535 CACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAA 81594 || || | || |||||||| || ||||||||||| | ||||| || | |||||| Sbjct 113823 CATGTCTTGAGCGTGTCATAAATACCTTCGATGCTATCCTCCTTCATATCGA-CAAGAA- 113766 Query 81595 CAGCTTGA---CATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGA 81651 ||| ||| | |||||| | || |||||||||| || || | || || Sbjct 113765 -AGCATGAAGCAAGCTGAGGCTGAGGGGTACCAGCATTGAACAAAGTCGGCGAGGCATGG 113707 Query 81652 ATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCG 81711 ||||||| | ||||||| || |||||| || | | ||| || | ||| Sbjct 113706 GTGAAATACTTCTGAGACATCAAGTGATAGGTCTCGATAGCCTTCTCAATGTCATTACCA 113647 Query 81712 TGAATACCGATAGCTACACGCATAAACATGTACTGGGG 81749 |||||||| | || |||||||| || | || ||| || Sbjct 113646 TGAATACCAACAGAGACACGCATCAAAAGGTGCTGAGG 113609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570303278248880