Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576635.1_202016-02-26] 999 sequences; 35,835,174 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq28 185 1e-41 >seq28 Length=119586 Score = 185 bits (204), Expect = 1e-41 Identities = 592/911 (65%), Gaps = 17/911 (2%) Strand=Plus/Minus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 |||||||| || || ||||||| |||| ||||| || || ||||| | | | | Sbjct 114213 TCAAATTCGTCACCATAAACATCGGCCAAGCCAGGGGCCTCGTTAGGACAGAAGAGAGTC 114154 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 || || || | | | ||| || ||||| || | || || |||| || ||| || Sbjct 114153 CAGTCGCCGTTGGCTTCAACTCGCTTCATGAACAAGTCCGGAGTCCAGAGGGCATAGAAG 114094 Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699 ||||| |||| ||| ||| || || || ||||| ||||| |||||||| | Sbjct 114093 AGATCGCGGGCTCTCACTTCCTCTTTACCGTGGTTCTTGCGGAGATCGAGGAACTCGAAG 114034 Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759 | ||| | ||||| || || | || || || | | |||| || || || || |||||| Sbjct 114033 ACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCACCTGGACGCTTGTTTCCTCCC 113974 Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819 || |||| ||||||||||||||| || | || | | ||| |||| ||| || || || Sbjct 113973 TGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATGGGAACAATACCATTGGAG 113914 Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAAT--ATTACTAATAGATAGGC 76877 | ||| || || ||| ||| || || ||||| || | | || | || | Sbjct 113913 GAACCGTTGGTACCACCAATGTAGGAGCCGGTAGCACGGATGCGGTGCACATTG--AGAC 113856 Query 76878 CTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCT 76937 | ||||| || || | || ||||| | ||||| || | |||||||| || || | Sbjct 113855 CGATTCCACCAGCGGTCTTCGAGATCAATGCACATGTCTTGAGCGTGTCATAAATACCTT 113796 Query 76938 CTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTC 76997 | || ||||| ||| |||| | | |||||| || || | ||| | ||| || | Sbjct 113795 CGATGCTATCCTCCTTCATATCGACAAGAAAGCATGAAGCAAGCTGAGGCTGAGGGGTAC 113736 Query 76998 CTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATG 77057 | ||||| ||||| || || || ||||| ||||| | || | ||| | | | || | Sbjct 113735 CAGCATTGAACAAAGTCGGCGAGGCATGGGTGAAATACTTCTGAGACATCAAGTGATAGG 113676 Query 77058 TTTCAATAACTGCTTCTATATCCCATT--GATGAATTCCTACAGCGACACGCATCAACAT 77115 | || ||| | ||||| || |||| |||||| || |||| |||||||||||| | Sbjct 113675 TCTCGATAGC--CTTCTCAATGTCATTACCATGAATACCAACAGAGACACGCATCAAAAG 113618 Query 77116 ATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGA-TTTTTCCAAAG 77174 |||||||| ||||| || ||| || || | ||||| || | || Sbjct 113617 GTGCTGAGGACGTTCAGCAACCTTTCCATCAATCCGARGYATTTATGACACGCTCAAGAG 113558 Query 77175 TTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAG 77232 | || || || ||| ||||||| ||||| || | ||||| | |||| | || || || Sbjct 113557 TCTTGAAGCCGAAAAAGTTGTAGTTGAAA--TCGCGGTCGTACACAATAGCGGAGTTGAG 113500 Query 77233 TTTGTCCTTATATTTGGTAACAATATCCATGACAGT--GGTAGAAATAATTGGAGATCGT 77290 || ||| || ||| | || |||| || | | || || ||||| | || Sbjct 113499 TTCGTCGGCATGTTTCATGAC--TATCTCGTACGTTTCCTTTGATATCATTGGGGCAGGT 113442 Query 77291 ATTCCATTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGtttt 77350 | ||| || || || | || | ||| |||| || || | ||| | || Sbjct 113441 TTCTTATTCTTTGGGTTGATGTAATGGTATAGGTCTGAAATAACCAGGGAGAATTGCTTC 113382 Query 77351 tttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGA 77410 ||||||| || || || ||||| || ||||| | |||||| ||||| || ||||| ||| Sbjct 113381 TTTGTTTGCTARTGAAGGTTCGAAACAGCTATACGAGCAGCAAGAATGGCGTAGTCTGGA 113322 Query 77411 TGTTGTGTAGT 77421 ||| ||||| Sbjct 113321 TGTGTGGTAGT 113311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712925497231680