Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576645.1_202016-02-26] 998 sequences; 36,322,355 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq12 125 2e-23 seq297 93.3 9e-14 >seq12 Length=261463 Score = 125 bits (138), Expect = 2e-23 Identities = 169/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 230410 GAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC-CTTATTGGCATGAACGCTGAACT 230468 || ||||||||| | ||||||| |||| || ||| ||| ||||||||||| | |||| Sbjct 244931 GAGAAGGAGTTCCTGACTGACGCTCTTCCTTG-CGCTCTTCTTGGCATGAACTCC-AACT 244874 Query 230469 T-ATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGA 230527 | ||| | |||||||| || ||||| |||||||| | | || || ||||| || | | Sbjct 244873 TGATGTGCCAGTACATTGAGTTCGTCGCCGACCGTCTCCTGGTCGCTCTTGGCAACAACA 244814 Query 230528 AAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGA 230587 | | ||| | | ||||| |||| || ||||| ||| || || || |||| Sbjct 244813 AGTACTTCAATGCCACCAACCCATTTGACTTCATGGACAACATCTCCCTGGCCGGTAAGA 244754 Query 230588 CCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 ||||||||||||| ||||||||| |||| || |||| ||||||||||| Sbjct 244753 CCAACTTCTTCGAGAAGCGTGTCGGTGATTACCAGAAAGCTGGTGTGATG 244704 >seq297 Length=36804 Score = 93.3 bits (102), Expect = 9e-14 Identities = 432/671 (64%), Gaps = 30/671 (4%) Strand=Plus/Minus Query 281532 CGCTTCACGTTGTCTACGATGTCTTTGGGATTATAACTGGGAATGTTAGTAGACCAACCG 281591 ||||| | |||||| |||||||| | ||| || || | || ||| | | ||| ||| Sbjct 13054 CGCTTAAGGTTGTCCACGATGTCCTCGGGGTTGTAGTTAGGGATGGATGAACTCCAGCCG 12995 Query 281592 GTTCCAATACCACTTGAACCATTTACCAAAATACTCGGGATAATAGGTACATAACATTCT 281651 || || ||||| | ||| || |||| || | || | | || || || ||| Sbjct 12994 GTGCCGATACCGTCAGCACCGTTAACCAGGATCATGGGAACGACGGGCACGTAGATTTCC 12935 Query 281652 GGTTCAATTTTATCACCATCATCATACAAATACTTCAGAAGGTTATCATCTGTATCGACG 281711 || || ||||| ||||||||||| | || | || || |||||| | | | Sbjct 12934 GGCTCGATTTTTTCACCATCATCCTCGTTGTAAGTAAGTAGAGGATCATCATGAGCATGG 12875 Query 281712 AAAACCTGTCGCGTCTTAGGGTTCAGTTTCGTGAAGATATACCTTGCACTCGCGTGGTCT 281771 || || |||| | || ||| ||| ||||||| | ||||| || |||| Sbjct 12874 AAGACACGTCGAGCGAACGGCGACAGGCGAGTGTAGATATAACGAGCACTGGCACAGTCT 12815 Query 281772 TTACCACCCTGCAGCCTCGAC--CCAAACTGACCCTCCGGCAACAACCAGTTAATGTTAT 281829 |||||||| || | ||| ||||| | ||| ||| || ||||| | || | Sbjct 12814 GATCCACCCTGGAGAC--GACTACCAAAGTTACCACTGGGCTCCAGACAGTTTACATTGT 12757 Query 281830 TGCTCCCGACGTAATCCTGAGCCAGGTTGACGATTGTCCCCTGAAGCGATACCTCACCGT 281889 || ||||||| | ||| |||||| |||||| ||| ||| || || | ||||||| Sbjct 12756 TGGACCCGACGAAGCTCTGTGCCAGGCCGACGATGGTCTGCTGCAGGGAGATGTCACCGT 12697 Query 281890 GGTGATAGGCGCTGTGTT--CGGCAACATAACCACTGAACTGTGCTACCTTCACGTCTGA 281947 | ||||| ||| || | | | ||| | ||| || | | ||||||| || Sbjct 12696 GTTGATA--CGCAGTCATACCCGAAACGTGACCCGCTAATTCGACCACCTTCATATCCTT 12639 Query 281948 TGTCAAGTTGCGTTTGAAAGCGCAA-TATAAT--ACTTTTCGTTGAGAAGGCTTGAAACC 282004 ||| ||||||| |||| ||| ||||| || || |||||| ||||||| || Sbjct 12638 CTTCAGGTTGCGTCGGAAA---CAAGTATAAAGAACCTTACGTTGACCGGGCTTGAGGCC 12582 Query 282005 ATCAACGACAGACGGAATGCTGCGTTCCAGGTCATA--CCGCGA----GAACAAAATAAG 282058 ||| ||||| || ||||| || || || ||| |||| | ||| | || || Sbjct 12581 ATCCACGACCGAAGGAAT----CGATC--GGACATTGTCCGCCATACTGAATAGGATGAG 12528 Query 282059 TTCCTTGTCAATGAAGTCGGGAACGGGAACCTCGGGCTTCTTGTGGTC-AAGTTGGTTTC 282117 ||||||| |||||||||| | || || || | ||| || ||| |||| | Sbjct 12527 CTCCTTGTTGATGAAGTCGGTGTATGAAATCTTGGACACTGAGTGATCCAAGAAGGTT-C 12469 Query 282118 CCGGCTCGTAT-GCCGTCATCCACTCCTTGCGATCCTCGGCCCGAGTCTTGTTGAAAGAA 282176 |||||| | || | || || |||||||||||| || |||||| ||||| ||||| | Sbjct 12468 CCGGCTTGAATTGACG-CAGCCACTCCTTGCGCTCATCGGCCTTCTTCTTGGAGAAAGCA 12410 Query 282177 CGATCGATGAG 282187 | || || || Sbjct 12409 AGCTCAATCAG 12399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057810473736740