Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576645.1_202016-02-26] 998 sequences; 36,322,355 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq142 116 4e-21 seq1 100 3e-16 >seq142 Length=90010 Score = 116 bits (128), Expect = 4e-21 Identities = 160/220 (73%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||||| ||||| || || ||||||||||| ||||||||||| || | || || || | Sbjct 83056 ACGCAGGACCAAGTGTAAGGTGCTCTCCTTCTGAATATTGTAGTCTGAGAGCGTGCGTCC 82997 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || ||||||||||| ||||| || || || || |||||||| | || | | |||||| Sbjct 82996 ATCCTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGGGGAATACCCTCCTT 82937 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 42168 ||| ||| ||| |||| ||| | | | ||||| ||| ||| || || | | Sbjct 82936 GTCTTGGATCTTTGACTTGA-CGTTGTCGATAGTGTCCGAGCT---TTCAACTTCCAAAG 82881 Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| || ||||| || |||||||| || ||||| ||||| Sbjct 82880 TGATAGTCTTGCCAGTGAGCGTCTTAACGAAGATCTGCAT 82841 Score = 96.9 bits (106), Expect = 4e-15 Identities = 131/180 (73%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| ||||| ||||| || | |||||| || |||| || ||||||||||||||||| Sbjct 82575 TCCTTCTGAATGTTGTAGTCCGACAGAGTACGACCGTCCTCGAGCTGCTTACCAGCGAAG 82516 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || | ||||||||||||| || | || || |||||| || |||| | | | ||| Sbjct 82515 ATCAAACGCTGCTGGTCGGGGGGAATGCCTTCTTTGTCC-TGGATTTTGCTCTTAACGTT 82457 Query 42138 G-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | || ||||| || || || || | ||||| || || || || || ||||| || Sbjct 82456 GTCGATGGTATCGCTTGACTCAACCTCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTCAC 82397 Score = 93.3 bits (102), Expect = 5e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 ||||| |||||||| ||| || || || |||||||| | || ||| || | || || Sbjct 82821 ACCAAGTGCAATGTAGACTCTTTCTGGATGTTGTAATCGGACAAAGTGCGGCCATCTTCG 82762 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 |||||||| || ||||| ||||| ||||||||||| | || | | ||| || | | || Sbjct 82761 AGCTGCTTGCCGGCGAAAATGAGACGCTGCTGGTCAGGAGGAATTCCCTCTTTAT-CTTG 82703 Query 42120 ATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178 | | |||| || | | | | ||||||| ||||| || || | ||| || || || Sbjct 82702 AATCTTTGACTTCACATTATCGATCGTGTCGGATGATTCAACCTCCAGCGTAATTGTCTT 82643 Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || || ||||| || || || ||||| Sbjct 82642 TCCGGTGAGAGTCTTGACGAAAATCTGCAT 82613 Score = 86.0 bits (94), Expect = 7e-12 Identities = 124/170 (73%), Gaps = 4/170 (2%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || || || |||| || || || | || || |||||||| |||||||| Sbjct 82274 CTCCTTCTGGATGTTATAGTCAGAGAGGGTACGGCCATCCTCAAGCTGCTTGCCAGCGAA 82215 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCG 42135 || || ||||||||||| | || | || ||||| ||| ||| | || | |||| || Sbjct 82214 GATCAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCC-TGAATCTTGCTCTTGA-CG 82157 Query 42136 TCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 42184 | | | | ||||||||||| || || || | |||||||| ||||| || Sbjct 82156 TTGTCGATAGTGTCGCTCGACTCGACCTCCAAAGTGATGGTCTTGCCGGT 82107 >seq1 Length=832478 Score = 100 bits (110), Expect = 3e-16 Identities = 133/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 42019 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 42078 |||| || || ||||| || ||| || || | || || ||||||||||| ||||| | Sbjct 445470 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCGGCGAAGA 445529 Query 42079 TGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 42138 | || ||||||||||||| || | | |||||||||| ||| || |||| ||| | Sbjct 445530 TCAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTG 445588 Query 42139 -CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | ||||||||||| || || |||| || ||||| || ||||| || ||||| || Sbjct 445589 TCGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACG 445648 Query 42198 AA 42199 || Sbjct 445649 AA 445650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543206023420320