Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576645.1_202016-02-26] 998 sequences; 36,322,355 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq12 131 2e-25 seq1 123 2e-23 seq142 113 5e-20 >seq12 Length=261463 Score = 131 bits (144), Expect = 2e-25 Identities = 175/243 (72%), Gaps = 3/243 (1%) Strand=Plus/Plus Query 133200 GTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCAC 133259 ||| | |||||| || || || || ||||| ||||| || ||||| | |||||| Sbjct 245365 GTGGATGTTCTCGATCATAATCTGGAAACCGTAGAAGCAACGAGCCTCAGGGATCTGCAC 245424 Query 133260 TTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAA 133319 ||| |||||| |||| ||| ||||||||||| ||||||||| ||| || || || Sbjct 245425 CTCTCCGCTGAAACGTTCGAGCAGGTTTTCGTTGACAATGCCGTCGGAGGCAGCAAAGAA 245484 Query 133320 GGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG---CTCCCAGTCGCG 133376 ||| || ||| | |||||| |||||||| || |||| ||| | ||||||| | Sbjct 245485 GGCAAGTACGCGAGAGATGAAGAAGCGCTCGTCATCATTCAGGCGGTTGTGCCAGTCGTG 245544 Query 133377 CGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTA 133436 ||||| || || || | |||||| ||||||| || || |||||||| || ||||| Sbjct 245545 AAGATCCTTAGAAAGATCAATTTCCTCGGCGGTCCAGAAAGAGGCCTCGGCCTTCTTGTA 245604 Query 133437 CAT 133439 ||| Sbjct 245605 CAT 245607 Score = 116 bits (128), Expect = 4e-21 Identities = 341/516 (66%), Gaps = 12/516 (2%) Strand=Plus/Plus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 |||||| ||| ||| || || || || || ||||| || || || || || || | Sbjct 244704 CATCACACCAGCTTTCTGGTAATCACCGACACGCTTCTCGAAGAAGTTGGTCTTACCGGC 244763 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGAT 132710 || ||| ||| ||| || || || ||||||| | ||| ||| |||| || | Sbjct 244764 CAGGGAGATGTTGTCCATGAAGTCAAATGGGTTGGTGGCATTGAAGTACTTGTTGTTGCC 244823 Query 132711 CAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATT 132770 || |||| || || | |||||| |||||||| ||||| || |||| | | | || Sbjct 244824 AAGAGCGACCAGGAGACGGTCGGCGACGAACTCAATGTACTGGCACATCAAGTTGGAGTT 244883 Query 132771 AAGTCCCAGCAGA-CGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCG 132829 | || || ||| |||| || || || || || || || | ||| |||| ||| | Sbjct 244884 CATGCCAAGAAGAGCGCAA-GGAAGAGCGTCAGTCAGGAACTCCTTCTCAATGGAGACAG 244942 Query 132830 CGTC---GGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGA 132886 | || | | ||| ||| || | | || ||| |||| | | ||| || Sbjct 244943 CTTCCACGATAACGTCCTCCACAATCTGAGGGTCGG--GGCGGTTGTTC-AGGTGCGAGA 244999 Query 132887 ACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGA 132946 | | || |||||||||||| || | ||||| || | || || || |||||| || Sbjct 245000 AGAGCAGGCAAGCAAAGTCAGTGTGGAGACCCTCATCACGAGAGATAAGCTCGTTGGAGA 245059 Query 132947 AAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCG 133006 | || | |||||||| | ||| || || || ||||| || || | |||||| || | Sbjct 245060 ATGTAAGACCGGGCATCAAGCCACGCTTCTTCAGCCAGAAGATAGAGGCGAAGGATCCGG 245119 Query 133007 AAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGT-GGCTTCT 133065 | ||||||| ||||| || || ||||| ||||| || |||| ||||| || | || || Sbjct 245120 AGAAGAAGATACCCTCAACAGCGGCGAAGGCCACGAGACGCTGACCGAAGGTCGACTCCT 245179 Query 133066 -TTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTT 133100 | ||| ||||||||| | ||||| || ||||| Sbjct 245180 GATCCTG--GATCCAGCGGATAGCCCAGTCAGCCTT 245213 >seq1 Length=832478 Score = 123 bits (136), Expect = 2e-23 Identities = 138/182 (76%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || |||||||| || ||||| ||| ||||||| ||| | | ||||| | | Sbjct 445650 TTCGTCAAGACCCTCACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGCGACACCATC 445591 Query 38313 CA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCT 38371 | |||| | || | || |||| ||||| ||||| || ||| ||||||| ||||| || Sbjct 445590 GACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCT 445532 Query 38372 CATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAA 38431 || | ||| || || ||||| || || | |||||||| | ||||||||||||||| || Sbjct 445531 GATCTTCGCCGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 445472 Query 38432 GG 38433 || Sbjct 445471 GG 445470 >seq142 Length=90010 Score = 113 bits (124), Expect = 5e-20 Identities = 159/221 (72%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 38251 TATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCG 38310 || |||| || || ||||| || || || |||||| | || || ||| | | ||| | | Sbjct 82392 TAGTCGTGAAGACCCTCACTGGAAAGACTATCACCCTTGAGGTTGAGTCAAGCGATACCA 82451 Query 38311 TGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGG 38369 | | |||| | | || |||| ||| |||||||| || |||||| ||||||| ||||| Sbjct 82452 TCGACAACGTTAAGAGCAAAA-TCCAGGACAAAGAAGGCATTCCCCCCGACCAGCAGCGT 82510 Query 38370 CTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAA 38429 | || | ||| || || ||||| || |||| || || || ||||||||||| || Sbjct 82511 TTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGTACTCTGTCGGACTACAACATTCAG 82570 Query 38430 AAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| | || || || ||||| ||||| ||| | || || Sbjct 82571 AAGGAATCTACTCTCCACTTGGTTCTGCGCTTGCGTGGTGG 82611 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| || || || || || | || || || | || Sbjct 82613 ATGCAGATTTTCGTCAAGACTCTCACCGGAAAGACAATTACGCTGGAGGTTGAATCATCC 82672 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || ||| || | || |||||||||||||| | ||||| Sbjct 82673 GACACGATCGATAATGTGAAGTCAAAGATTCAAGATAAAGAGGGAATTCCTCCTGACCAG 82732 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||||| ||| ||||| ||||| || || | ||||| | ||| |||||| Sbjct 82733 CAGCGTCTCATTTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACTTTGTCCGATTACAAC 82792 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| || || | || |||| ||||| || ||| Sbjct 82793 ATCCAGAAAGAGTCTACATTGCACTTGGTCCTCCGT 82828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500166560344320