Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576645.1_202016-02-26] 998 sequences; 36,322,355 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq14 118 1e-21 seq12 114 2e-20 >seq14 Length=258169 Score = 118 bits (130), Expect = 1e-21 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937 ||| | |||||||| | | ||||| |||||||||| || | ||||| ||||||||| Sbjct 143449 TGGTATGCTATTCTGGAGGCTCAGACCGAGACTGGAAATCCTTTCATGCTGTACAAGGAT 143508 Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997 || ||||||| ||||| ||||| ||||| ||||||| ||| ||||| || || || Sbjct 143509 GCCTGTAACAGAAAGAGCAACCAGAAGAACCTGGGAACGATCCGCAGCTCCAACCTCTGT 143568 Query 75998 ACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATC 76057 || ||||| | |||||||| | | ||||||| ||||| ||||| | || || | Sbjct 143569 ACTGAAATCATTGAGTACACTGCTCCGGATGAGGTTGCTGTCTGCAACCTTGCCTCTCTT 143628 Query 76058 GCCCTTCC 76065 ||||| || Sbjct 143629 GCCCTGCC 143636 Score = 89.7 bits (98), Expect = 6e-13 Identities = 205/307 (67%), Gaps = 9/307 (3%) Strand=Plus/Plus Query 75522 ATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGG 75581 |||||||| |||| ||||| || || || ||| ||| || | |||||| | || | | Sbjct 143033 ATGGTATTGTTCCCATGCTCCGGGTGTTCAACAACACTGCCAGATATGTAGACCAGGGAG 143092 Query 75582 G------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCATGCCGATATCA 75635 | ||||| ||| | | | || | |||||||| || ||||| |||||| || Sbjct 143093 GAAACAAGCGTCC--AGGTG-CTTTTGCCATTTACTTGGAGCCTTGGCACGCCGATGTCT 143149 Query 75636 TGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCT 75695 | |||||||| || | || ||||| ||| | || || | | | ||||||| Sbjct 143150 TCGAGTTCCTCGATCTCCGCAAGAACCACGGTAAAGAGGAAGTGAGAGCCCGCGATCTCT 143209 Query 75696 TTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGT 75755 | | |||| |||| ||| ||| | ||||||||||| ||||| | || | ||| Sbjct 143210 TCTATGCCCTCTGGACTCCGGACTTGTTCATGAAGCGAGTTGAAGCCAACGGCGACTGGA 143269 Query 75756 CTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAG 75815 |||| |||||||| || |||| || || | |||| | ||||| || ||||| | Sbjct 143270 CTCTCTTCTGTCCTAACGAGGCCCCTGGCTTGGCCGATGTTTATGGTGACGAATTTGAGG 143329 Query 75816 CCCTCTA 75822 | ||||| Sbjct 143330 CACTCTA 143336 >seq12 Length=261463 Score = 114 bits (126), Expect = 2e-20 Identities = 299/453 (66%), Gaps = 10/453 (2%) Strand=Plus/Minus Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128 |||||| |||| || | || || || ||| |||||||||||||||||||| || | Sbjct 245170 CCTTCGGTCAGCGTCTCGTGGCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCCGGATCCT 245111 Query 65129 TCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATG 65188 || | |||| | ||| |||||||||| || | ||||| || || ||||| || | Sbjct 245110 TCGCCTCTATCTTCTGGCTGAAGAAGCGTGGCTTGATGCCCGGTCTTACATTCTCCAACG 245051 Query 65189 AACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTT 65248 | ||||| || || ||||||||||||||| || ||||| ||||||| | Sbjct 245050 AGCTTATCTCTCGTGATGAGGGTCTCCACACTGACTTTGCTTGCCTGCTCTTCTCGCACC 244991 Query 65249 TGCGTAATAGACCCACTACCGAAACTAT---CCACGCCATCGTGAAAGAGGCGGTTGAGA 65305 || || | ||| | | | | | ||| |||||| || || || | Sbjct 244990 TGAACAACCGCCCCGACCCTCAGATTGTGGAGGACGTTATCGTG---GAAGCTGTCTCCA 244934 Query 65306 TTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGA 65365 ||||||| | |||| | ||||| || || || ||| | || |||||||| | Sbjct 244933 TTGAGAAGGAGTTCCTGACTGACGCTCTTCCTTGCGCTCTTCTTGGCATGAACTCCAACT 244874 Query 65366 AGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCCAC 65425 ||||| | |||||||||||| || | || |||||||| || || || Sbjct 244873 TGATGTGCCAGTACATTGAGTTCGTCGCCGACCGTCTCCTGGTCGCTCTT--GGCAACAA 244816 Query 65426 CCATT--TGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAA 65483 | | | | || || | || ||||||||||| ||||| ||||| ||| | || || Sbjct 244815 CAAGTACTTCAATGCCACCAACCCATTTGACTTCATGGACAACATCTCCCTGGCCGGTAA 244756 Query 65484 GACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516 |||||||||||| |||||||| || || || || Sbjct 244755 GACCAACTTCTTCGAGAAGCGTGTCGGTGATTA 244723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596562157794240