Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576645.1_202016-02-26] 998 sequences; 36,322,355 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq142 127 1e-24 seq1 105 4e-18 seq22 89.7 3e-13 >seq142 Length=90010 Score = 127 bits (140), Expect = 1e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 |||||||| ||| | |||||||||||||||||| || ||||| || || |||| |||| Sbjct 83053 CAGGACCAAGTGTAAGGTGCTCTCCTTCTGAATATTGTAGTCTGAGAGCGTGCGTCCATC 82994 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| || || ||||| || |||||||||||| | || | ||||||||||| Sbjct 82993 CTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGGGGAATACCCTCCTTGTC 82934 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || ||| |||||| | || | || | || || || | || || || Sbjct 82933 TTGGATCTTTGACTTGACGTTGTCGATAGTGTCCGAGCTTTCAACTTCCAAAGTGATAGT 82874 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| || ||||| ||||| || ||||||||||| Sbjct 82873 CTTGCCAGTGAGCGTCTTAACGAAGATCTGCAT 82841 Score = 100 bits (110), Expect = 2e-16 Identities = 154/220 (70%), Gaps = 10/220 (5%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || | ||| | ||| |||| ||| | || |||||||||||||| |||||||| Sbjct 82611 CCACCACGCAAGCGCAGAACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCCGAC 82552 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 || | || | || || || ||||| || |||||||||| || |||||||| | || Sbjct 82551 AGAGTACGACCGTCCTCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCGGGGGGA 82492 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACG-----GATGCTATCGATTCATTGGCCT 34925 | || || ||||| | ||||| || ||| |||| ||||| || | || Sbjct 82491 ATGCCTTCTTTGTCCTGGATTTTGCTCTTAACGTTGTCGATGGTATCGCTT-----GACT 82437 Query 34926 CGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | || |||| ||| || |||||||| ||||||||||| || Sbjct 82436 CAACCTCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTCAC 82397 Score = 91.5 bits (100), Expect = 1e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||| | |||| ||||||||| ||||||||||| || ||| | || |||| Sbjct 82294 AGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGAGAGGGTACGGCCATCC 82235 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || ||||||||||| || |||||||| | || | || ||||| || Sbjct 82234 TCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCC 82175 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || | | |||||| || | || |||||| Sbjct 82174 TGAATCTTGCTCTTGACGTTGTCGATAGTGTCGCTCGACTCGACCTCCAAAGTGATGGTC 82115 Query 34946 TTTCCCGT 34953 || || || Sbjct 82114 TTGCCGGT 82107 >seq1 Length=832478 Score = 105 bits (116), Expect = 4e-18 Identities = 132/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 ||||||| ||||| ||||| ||| |||| |||| || || ||||| |||||||||| Sbjct 445470 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCGGCGAAGA 445529 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 |||| || |||||||| | || | ||||||||||| | || || |||||| Sbjct 445530 TCAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGT 445589 Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967 | || | || | | ||| || || | ||| |||||||| |||||||||||||| || | Sbjct 445590 CGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGA 445649 Query 34968 A 34968 | Sbjct 445650 A 445650 >seq22 Length=223057 Score = 89.7 bits (98), Expect = 3e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| |||| ||||||||| ||||| ||||| || || | || | || Sbjct 35798 AGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTACGGCCGTCC 35857 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| || ||||||||||| || |||||||| | || | ||||||||||| Sbjct 35858 TCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGGGGGATTCCCTCCTTGTC 35916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325688838557762