Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576645.1_202016-02-26] 998 sequences; 36,322,355 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq142 143 6e-29 seq1 98.7 2e-15 >seq142 Length=90010 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | |||||| | ||| | ||| || || || | |||||| || | | || Sbjct 83062 ACGGAGACGCAGGACCAAGTGTAAGGTGCTCTCCTTCTGAATATTGTAGTCTGAGAGCGT 83003 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| ||||||||||| ||||| |||||||| ||||| ||||| || |||||||| Sbjct 83002 GCGTCCATCCTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGGGGAATACC 82943 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||||||||||||| ||| || ||||| ||||| ||| |||| || || || Sbjct 82942 CTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATAGTGTCCGAGCTTTCAACTTCCAA 82883 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||||||| || | || || | ||| | ||||| Sbjct 82882 AGTGATAGTCTTGCCAGTGAGCGTCTTAACGAAGATCTGCAT 82841 Score = 109 bits (120), Expect = 1e-18 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || ||||||||||| ||||| || || |||| || || || | | || | ||||| Sbjct 82294 AGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGAGAGGGTACGGCCATCC 82235 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || || || ||||| || ||||| |||||||| || Sbjct 82234 TCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCC 82175 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| || ||||| ||||| | || || || || ||||| ||| Sbjct 82174 TGAATCTTGCTCTTGACGTTGTCGATAGTGTCGCTCGACTCGACCTCCAAAGTGATGGTC 82115 Query 225682 TTGCCCGT 225689 ||||| || Sbjct 82114 TTGCCGGT 82107 Score = 102 bits (112), Expect = 2e-16 Identities = 136/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 ||| || | ||||||||| ||||| || || | ||||| || | || ||| | || || Sbjct 82597 CAGAACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCCGACAGAGTACGACCGTC 82538 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 || |||||||| ||||||||||| | || || |||||||| ||||| ||||| ||||| Sbjct 82537 CTCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCGGGGGGAATGCCTTCTTTGTC 82478 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 ||||| || ||| || |||||||| || | || || || | ||||| || Sbjct 82477 CTGGATTTTGCTCTTAACGTTGTCGATGGTATCGCTTGACTCAACCTCAAGGGTGATAGT 82418 Query 225681 CTTGCCCGT 225689 ||| || || Sbjct 82417 CTTTCCAGT 82409 >seq1 Length=832478 Score = 98.7 bits (108), Expect = 2e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| ||| || || | ||||| || |||||||| || |||||||| Sbjct 445472 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCGGCGAAGATC 445531 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || || || |||||||| || ||||| |||||||| |||||||| ||| || ||| Sbjct 445532 AGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 445591 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 |||||||| | || ||||| | || || ||||| ||||| Sbjct 445592 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGT 445635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192515951252612