Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576655.1_202016-02-26]
995 sequences; 36,412,503 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq4 214 2e-50
>seq4
Length=410692
Score = 214 bits (236), Expect = 2e-50
Identities = 598/909 (66%), Gaps = 14/909 (2%)
Strand=Plus/Minus
Query 65982 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 66041
|| || ||||| || |||||| | |||| ||||| || | ||||| | | | |
Sbjct 171218 TCAAATTCGTCACCATAAACATCGGCCAAGCCAGGGGCCTCGTTAGGACAGAAGAGAGTC 171159
Query 66042 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 66100
|| || |||| | | ||||| ||||| || | || ||| |||| || || ||| ||
Sbjct 171158 CAGTCGCCGTTGGCTTCAACTCGCTTCATGAACAAGTCCGGAGTCCAGAGGGC-ATAGAA 171100
Query 66101 TAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 66160
| ||| | || ||| |||||| || || ||||| |||||||||||| | |
Sbjct 171099 GAGATCGCGGGCTCTCACTTCCTCTTTACCGTGGTTCTTGCGGAGATCGAGGAACTCGAA 171040
Query 66161 AATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 66220
| ||| ||||| || |||||||| ||||| | | | || || || |||||||||||
Sbjct 171039 GACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCACCTGGACGCTTGTTTCCTCC 170980
Query 66221 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 66280
||| |||| ||||| || ||||| || | || | | ||| |||| ||||||||||||
Sbjct 170979 CTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATGGGAACAATACCATTGGA 170920
Query 66281 TGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAAT--ATTACTAATTGATAGA 66338
| ||| ||||| || || ||| || | ||||| || | | |||| |||
Sbjct 170919 GGAACCGTTGGTACCACCAATGTAGGAGCCGGTAGCACGGATGCGGTGCACATTG--AGA 170862
Query 66339 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 66398
|| ||||| || || | || ||||| ||||| ||| || | ||| ||||| || ||
Sbjct 170861 CCGATTCCACCAGCGGTCTTCGAGATCAATGCACATGTCTTGAGCGTGTCATAAATACCT 170802
Query 66399 TCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 66458
|| || ||||| ||| |||| | | ||||| || || | || | || ||
Sbjct 170801 TCGATGCTATCCTCCTTCATATCGACAAGAAAGCATGAAGCAAGCTGAGGCTGAGGGGTA 170742
Query 66459 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 66518
|| ||||| || || || || || || || || || | || | ||| | | | ||
Sbjct 170741 CCAGCATTGAACAAAGTCGGCGAGGCATGGGTGAAATACTTCTGAGACATCAAGTGATAG 170682
Query 66519 GTCTCAATAGCTGAGTCTATATCCCATT--GATGAATTCCTACTGCGACACGCATTAACA 66576
||||| ||||| ||| || |||| |||||| || || | ||||||||| || |
Sbjct 170681 GTCTCGATAGC--CTTCTCAATGTCATTACCATGAATACCAACAGAGACACGCATCAAAA 170624
Query 66577 TGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAG 66636
||||||||| | |||| | | ||| | || | |||||| || || | ||
Sbjct 170623 GGTGCTGAGGACGTTCAGCAACCTTTCCATCAATCCGAAGCAAGTATGACCGCTCAAGAG 170564
Query 66637 TTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 66694
| || || || ||| ||||||| ||||| || || ||||| | |||| | ||||||||
Sbjct 170563 TCTTGAAGCCGAAAAAGTTGTAGTTGAAA--TCGCGGTCGTACACAATAGCGGAGTTGAG 170506
Query 66695 TTTATCCTTATATTTGTTAACTACATCCATGGTAATACTTGAAATAATCGGAGAATGTTT 66754
|| || || ||| | |||| || || |||| || || || | | ||||
Sbjct 170505 TTCGTCGGCATGTTTCATGACTATCTCATACGTTTCCTTTGATATCATTGGGGCAGGTTT 170446
Query 66755 CCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttt 66814
| ||| || || |||| || | | ||| || || || ||| | || ||
Sbjct 170445 CTTATTCTTTGGGTTGATGTAATGGTATAGGTCTGAAATAACCAGGGAGAATTGCTTCTT 170386
Query 66815 tGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATG 66874
||||| ||||| || || || || ||||| | ||| || | |||||| || || |||||
Sbjct 170385 TGTTTGCTTGTGAAGGTTCGAAACAGCTATACGAGCAGCAAGAATGGCGTAGTCTGGATG 170326
Query 66875 TTGTGTAGT 66883
| |||||
Sbjct 170325 TGTGGTAGT 170317
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658164613975800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |