Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576655.1_202016-02-26]
995 sequences; 36,412,503 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq19 129 9e-25
seq4 89.7 8e-13
>seq19
Length=276443
Score = 129 bits (142), Expect = 9e-25
Identities = 333/502 (66%), Gaps = 23/502 (5%)
Strand=Plus/Minus
Query 125361 ATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCC 125420
|| ||||| |||||| | |||| || || |||||| | || | |||| | | ||
Sbjct 245246 ATTCGTAAGAAGGCTGACTGGGCTATCCGCTGGATCCAGGATCAGGAGTCGACCTTCGGT 245187
Query 125421 GACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCC 125480
| | || ||||| |||||||| || ||||| |||||||| || || || || |
Sbjct 245186 CAGCGTCTCGTGGCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCCGGATCCTTCGCCTCT 245127
Query 125481 ATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATA 125540
||||| ||||| |||||||| || | |||||||| || || | |||||| ||||
Sbjct 245126 ATCTTCTGGCTGAAGAAGCGTGGCTTGATGCCCGGTCTTACATTCTCCAACGAGCTTATC 245067
Query 125541 TCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT--ATCTG 125597
||||| || ||||| || ||| ||||||||| || || || ||||| || |
Sbjct 245066 TCTCGTGATGAGGGTCTCCACACTGACTTTGCTTGCCTGCTCTTCTCGCACCTGAACAAC 245007
Query 125598 CGTCCCGAGTG-CAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAG 125656
|| ||||| ||||| | || | || ||| || || || ||
Sbjct 245006 CGCCCCGACCCTCAGATTGTG----GAGGACGTTATCG----TGGAA-----GCTGTCTC 244960
Query 125657 GATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAA 125716
|| || | ||||| || || || | || || | | |||||||||||| |||
Sbjct 244959 CATTGAGAAGGAGTTCCTGACTGACGCTCTTCCTTGCGCTCTTCTTGGCATGAACTCCAA 244900
Query 125717 GCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCG 125776
| |||||| ||||||| ||||| || || || ||||| ||| || | ||||
Sbjct 244899 CTTGATGTGCCAGTACATTGAGTTCGTCGCCGACCGTCTCCTGGTCGCTCT---TGGCAA 244843
Query 125777 CAAGATTTAC---AACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGG 125833
||| | ||| || |||| || || ||||| |||||| || ||| || || | ||
Sbjct 244842 CAACAAGTACTTCAATGCCACCAACCCATTTGACTTCATGGACAACATCTCCCTGGCCGG 244783
Query 125834 TAAGACCAACTTTTTCGAGAAG 125855
|||||||||||| |||||||||
Sbjct 244782 TAAGACCAACTTCTTCGAGAAG 244761
Score = 118 bits (130), Expect = 2e-21
Identities = 195/279 (70%), Gaps = 2/279 (1%)
Strand=Plus/Minus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| |||||||||| ||||| ||||||| || ||||| | ||| || | |||||
Sbjct 245640 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAAATTGATCTT 245581
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|| ||||| || |||| ||| | | || ||| ||| ||||| || || ||
Sbjct 245580 TCTAAGGATCTTCACGACTGGCACAACCGCCTGAATGATGACGAGCGCTTCTTCATCTCT 245521
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198
| | | | ||||||||||| | |||||| || || |||||||| || ||| | ||
Sbjct 245520 CGCGTACTTGCCTTCTTTGCTGCCTCCGACGGCATTGTCAACGAAAACCTGCTCGAGCGT 245461
Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGAT 125257
||| |||| || || || |||| ||| ||||| ||||| ||||| || |||||
Sbjct 245460 TTCAGCGGAGAGGTGCAGATCCCTGAGG-CTCGTTGCTTCTACGGTTTCCAGATTATGAT 245402
Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGA 125296
|||||| | ||| | || | |||||| ||||||||
Sbjct 245401 CGAGAACATCCACGCTGAGACCTACTCTCTTCTGATTGA 245363
>seq4
Length=410692
Score = 89.7 bits (98), Expect = 8e-13
Identities = 213/318 (67%), Gaps = 8/318 (3%)
Strand=Plus/Plus
Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCACG 96865
|| ||||| | ||| ||| | || || |||||| | ||| ||| || || || |
Sbjct 170908 ACCAACGGTTCCTCCAATGGTATTGTTCCCATGCTCCGGGTGTTCAACAACACTGCCA-G 170966
Query 96866 ATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTG 96925
||| || ||||| || || || || ||||| ||| | ||| | |||||||| |||||
Sbjct 170967 ATATGTAGACCAGGGAGGAAACAAGCGTCCAGGTGCTTTTGCCATTTACTTGGAGCCTTG 171026
Query 96926 GCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCA-- 96983
|||||| || || || || || |||| | ||||| ||| || | |||||| |
Sbjct 171027 GCACGCCGATGTCTTCGAGTTCCTCGATCTCCGCAAGAACCACGG---TAAAGAGGAAGT 171083
Query 96984 -CGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAA 97042
||||| | || | || ||||| |||||| || || |||||||||||||| || |
Sbjct 171084 GAGAGCCCGCGATCTCTTCTATGCCCTCTGGACTCCGGACTTGTTCATGAAGCGAGTTGA 171143
Query 97043 CGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTG 97102
| | ||| |||||| || | || || || | | || || || ||||| |
Sbjct 171144 AGCCAACGGCGACTGGACTCTCTTCTGTCCTAACGAGGCCCCTGGCTTGGCCGATGTTTA 171203
Query 97103 GGGCGAAGAGTTTGAGGC 97120
|| || || ||||||||
Sbjct 171204 TGGTGACGAATTTGAGGC 171221
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741049983076200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |