Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576655.1_202016-02-26] 995 sequences; 36,412,503 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq4 163 4e-35 >seq4 Length=410692 Score = 163 bits (180), Expect = 4e-35 Identities = 608/938 (65%), Gaps = 24/938 (3%) Strand=Plus/Minus Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576 || ||||| || || ||||||| |||| ||||| || || ||||| | | | | Sbjct 171218 TCAAATTCGTCACCATAAACATCGGCCAAGCCAGGGGCCTCGTTAGGACAGAAGAGAGTC 171159 Query 69577 CACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AA 69635 || | | | | | |||||| ||||| || | || ||| |||| || || ||| || Sbjct 171158 CAGTCGCCGTTGGCTTCAACTCGCTTCATGAACAAGTCCGGAGTCCAGAGGGC-ATAGAA 171100 Query 69636 GAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCAT 69695 |||||| | || ||| ||| || || || || || |||||||| ||||| | Sbjct 171099 GAGATCGCGGGCTCTCACTTCCTCTTTACCGTGGTTCTTGCGGAGATCGAGGAACTCGAA 171040 Query 69696 AATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCC 69755 | ||| | ||||| || || | || || || | | || || || || |||||||| Sbjct 171039 GACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCACCTGGACGCTTGTTTCCTCC 170980 Query 69756 CTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGA 69815 ||| |||| |||||||||||||| || | || | ||||| |||| ||||||||| || Sbjct 170979 CTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATGGGAACAATACCATTGGA 170920 Query 69816 TTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAAT--ATTACTAATAGATAGA 69873 ||| || || ||| ||| || || | || || || | | || | ||| Sbjct 170919 GGAACCGTTGGTACCACCAATGTAGGAGCCGGTAGCACGGATGCGGTGCACATTG--AGA 170862 Query 69874 CCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCC 69933 || ||||| || || | || ||||| | ||||| || | |||||||| ||||| Sbjct 170861 CCGATTCCACCAGCGGTCTTCGAGATCAATGCACATGTCTTGAGCGTGTCATAAATACCT 170802 Query 69934 TCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTT 69993 || |||||||| || |||| | | |||||| || || | ||| | || || Sbjct 170801 TCGATGCTATCCTCCTTCATATCGACAAGAAAGCATGAAGCAAGCTGAGGCTGAGGGGTA 170742 Query 69994 CCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTAT 70053 || ||||| || || || || || || || ||||| | || | ||| | || | || Sbjct 170741 CCAGCATTGAACAAAGTCGGCGAGGCATGGGTGAAATACTTCTGAGACATCAAGTGATAG 170682 Query 70054 GTTTCAATAGCTGATTCTATATCCCACT--GATGAATTCCTATCGCGACACGCATCAACA 70111 || || ||||| |||| || || | |||||| || | | |||||||||||| | Sbjct 170681 GTCTCGATAGC--CTTCTCAATGTCATTACCATGAATACCAACAGAGACACGCATCAAAA 170624 Query 70112 TATGCTGAGGTCGTT---CTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCA 70168 |||||||| |||| | ||| || || | || | || |||||| || | Sbjct 170623 GGTGCTGAGGACGTTCAGCAACCTTTCCATCA---ATCCGAAGCAAGTATGACCGCTCAA 170567 Query 70169 GAGTTTTAAACCCAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATAACAGAATT 70226 |||| || || || ||| ||||||| ||||| || | ||||| | |||| | || || Sbjct 170566 GAGTCTTGAAGCCGAAAAAGTTGTAGTTGAAA--TCGCGGTCGTACACAATAGCGGAGTT 170509 Query 70227 TAGTTTATCCTTATATTTGGTAACTATATCCATAACAGT-AGGTGAGATAATCGGAGATC 70285 |||| || || ||| | ||||| | |||| | ||| || || || | Sbjct 170508 GAGTTCGTCGGCATGTTTCATGACTATCT-CATACGTTTCCTTTGATATCATTGGGGCAG 170450 Query 70286 GTTTACCATTTTTAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTAAATAGtt 70345 |||| ||| || || || | || | | ||| ||| || || ||| | | Sbjct 170449 GTTTCTTATTCTTTGGGTTGATGTAATGGTATAGGTCTGAAATAACCAGGGAGAATTGCT 170390 Query 70346 tttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAG 70405 | ||||||| |||||| | || || | ||||| | || || ||||| || ||||| | Sbjct 170389 TCTTTGTTTGCTTGTGAAGGTTCGAAACAGCTATACGAGCAGCAAGAATGGCGTAGTCTG 170330 Query 70406 GATGTTGTGTAGTACAAGTA-GCTGCTATTTCCGCAGC 70442 ||||| ||||| || ||| || || | || ||||| Sbjct 170329 GATGTGTGGTAGT-CATGTATGCCGCAGTCTCAGCAGC 170293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686900256571800