Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576655.1_202016-02-26] 995 sequences; 36,412,503 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq4 217 2e-51 >seq4 Length=410692 Score = 217 bits (240), Expect = 2e-51 Identities = 600/910 (66%), Gaps = 16/910 (2%) Strand=Plus/Minus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 |||||||| || || ||||||| |||| ||||| || || ||||| | | | | Sbjct 171218 TCAAATTCGTCACCATAAACATCGGCCAAGCCAGGGGCCTCGTTAGGACAGAAGAGAGTC 171159 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 || || || | | | ||| || ||||| || | || || |||| || ||| || Sbjct 171158 CAGTCGCCGTTGGCTTCAACTCGCTTCATGAACAAGTCCGGAGTCCAGAGGGCATAGAAG 171099 Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699 ||||| |||| ||| ||| || || || ||||| ||||| |||||||| | Sbjct 171098 AGATCGCGGGCTCTCACTTCCTCTTTACCGTGGTTCTTGCGGAGATCGAGGAACTCGAAG 171039 Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759 | ||| | ||||| || || | || || || | | |||| || || || || |||||| Sbjct 171038 ACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCACCTGGACGCTTGTTTCCTCCC 170979 Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819 || |||| ||||||||||||||| || | || | | ||| |||| ||| || || || Sbjct 170978 TGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATGGGAACAATACCATTGGAG 170919 Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAAT--ATTACTAATAGATAGGC 76877 | ||| || || ||| ||| || || ||||| || | | || | || | Sbjct 170918 GAACCGTTGGTACCACCAATGTAGGAGCCGGTAGCACGGATGCGGTGCACATTG--AGAC 170861 Query 76878 CTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCT 76937 | ||||| || || | || ||||| | ||||| || | |||||||| || || | Sbjct 170860 CGATTCCACCAGCGGTCTTCGAGATCAATGCACATGTCTTGAGCGTGTCATAAATACCTT 170801 Query 76938 CTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTC 76997 | || ||||| ||| |||| | | |||||| || || | ||| | ||| || | Sbjct 170800 CGATGCTATCCTCCTTCATATCGACAAGAAAGCATGAAGCAAGCTGAGGCTGAGGGGTAC 170741 Query 76998 CTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATG 77057 | ||||| ||||| || || || ||||| ||||| | || | ||| | | | || | Sbjct 170740 CAGCATTGAACAAAGTCGGCGAGGCATGGGTGAAATACTTCTGAGACATCAAGTGATAGG 170681 Query 77058 TTTCAATAACTGCTTCTATATCCCATT--GATGAATTCCTACAGCGACACGCATCAACAT 77115 | || ||| | ||||| || |||| |||||| || |||| |||||||||||| | Sbjct 170680 TCTCGATAGC--CTTCTCAATGTCATTACCATGAATACCAACAGAGACACGCATCAAAAG 170623 Query 77116 ATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGT 77175 |||||||| ||||| || ||| || || | ||||||||| || | ||| Sbjct 170622 GTGCTGAGGACGTTCAGCAACCTTTCCATCAATCCGAAGCAAGTATGACCGCTCAAGAGT 170563 Query 77176 TTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGT 77233 || || || ||| ||||||| ||||| || | ||||| | |||| | || || ||| Sbjct 170562 CTTGAAGCCGAAAAAGTTGTAGTTGAAA--TCGCGGTCGTACACAATAGCGGAGTTGAGT 170505 Query 77234 TTGTCCTTATATTTGGTAACAATATCCATGACAGT--GGTAGAAATAATTGGAGATCGTA 77291 | ||| || ||| | || || | ||| || | | || || ||||| | || Sbjct 170504 TCGTCGGCATGTTTCATGACTATCT-CAT-ACGTTTCCTTTGATATCATTGGGGCAGGTT 170447 Query 77292 TTCCATTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGttttt 77351 | ||| || || || | || | ||| |||| || || | ||| | || | Sbjct 170446 TCTTATTCTTTGGGTTGATGTAATGGTATAGGTCTGAAATAACCAGGGAGAATTGCTTCT 170387 Query 77352 ttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGAT 77411 |||||| |||||| || ||||| || ||||| | |||||| ||||| || ||||| |||| Sbjct 170386 TTGTTTGCTTGTGAAGGTTCGAAACAGCTATACGAGCAGCAAGAATGGCGTAGTCTGGAT 170327 Query 77412 GTTGTGTAGT 77421 || ||||| Sbjct 170326 GTGTGGTAGT 170317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712925532878400