Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576715.1_202016-02-26] 999 sequences; 36,329,774 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq41 219 5e-52 >seq41 Length=173186 Score = 219 bits (242), Expect = 5e-52 Identities = 599/909 (66%), Gaps = 14/909 (2%) Strand=Plus/Minus Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052 || || ||||| || |||||| | ||| ||||| || | ||||| | | | | Sbjct 115709 TCAAATTCGTCACCATAAACATCGGCCAAGCCAGGGGCCTCGTTAGGACAGAAGAGAGTC 115650 Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 63111 || || |||| | | ||||| ||||| || | || ||| |||| || || ||| || Sbjct 115649 CAGTCGCCGTTGGCTTCAACTCGCTTCATGAACAAGTCCGGAGTCCAGAGGGC-ATAGAA 115591 Query 63112 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63171 ||||| | || ||| |||||| || || ||||| |||||||||||| | | Sbjct 115590 GAGATCGCGGGCTCTCACTTCCTCTTTACCGTGGTTCTTGCGGAGATCGAGGAACTCGAA 115531 Query 63172 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63231 | ||| | ||||| || |||||||| ||||| | | | || || || ||||||||||| Sbjct 115530 GACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCACCTGGACGCTTGTTTCCTCC 115471 Query 63232 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 63291 ||| |||| ||||| || ||||| || | || | | ||| |||| |||||||||||| Sbjct 115470 CTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATGGGAACAATACCATTGGA 115411 Query 63292 TGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGA 63349 | ||| ||||| || || ||| || | ||||| || | | |||| ||| Sbjct 115410 GGAACCGTTGGTACCACCAATGTAGGAGCCGGTAGCACGGATGCGGTGCACATTG--AGA 115353 Query 63350 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 63409 || ||||| || || | || ||||| ||||| ||| || | ||| ||||| || || Sbjct 115352 CCGATTCCACCAGCGGTCTTCGAGATCAATGCACATGTCTTGAGCGTGTCATAAATACCT 115293 Query 63410 TCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 63469 || || ||||| ||| |||| | | ||||| || || | || | || || Sbjct 115292 TCGATGCTATCCTCCTTCATATCGACAAGAAAGCATGAAGCAAGCTGAGGCTGAGGGGTA 115233 Query 63470 CCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTAC 63529 || ||||| || || || || || || || || || | || | ||| | | | || Sbjct 115232 CCAGCATTGAACAAAGTCGGCGAGGCATGGGTGAAATACTTCTGAGACATCAAGTGATAG 115173 Query 63530 GTCTCAATAGCTGAGTCTATATCCCATT--GATGAATTCCTACTGCGACACGCATTAACA 63587 ||||| ||||| ||| || |||| |||||| || || | ||||||||| || | Sbjct 115172 GTCTCGATAGC--CTTCTCAATGTCATTACCATGAATACCAACAGAGACACGCATCAAAA 115115 Query 63588 TGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAG 63647 ||||||||| | |||| | | ||| | || | |||||| || || | || Sbjct 115114 GGTGCTGAGGACGTTCAGCAACCTTTCCATCAATCCGAAGCAAGTATGACCGCTCAAGAG 115055 Query 63648 TTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAG 63705 | || || || ||| ||||||| ||||| || || ||||| | |||| | |||||||| Sbjct 115054 TCTTGAAGCCGAAAAAGTTGTAGTTGAAA--TCGCGGTCGTACACAATAGCGGAGTTGAG 114997 Query 63706 TTTATCCTTATATTTGTTAACTACATCCATGGTAATACTTGAAATAATAGGAAAATGTTT 63765 || || || ||| | |||| || || |||| || || || | |||| Sbjct 114996 TTCGTCGGCATGTTTCATGACTATCTCGTACGTTTCCTTTGATATCATTGGGGCAGGTTT 114937 Query 63766 CCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttt 63825 | ||| || || |||| || | | ||| || || || ||| | || || Sbjct 114936 CTTATTCTTTGGGTTGATGTAATGGTATAGGTCTGAAATAACCAGGGAGAATTGCTTCTT 114877 Query 63826 tGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATG 63885 ||||| ||||| || || || || ||||| | ||| || |||||||| || || ||||| Sbjct 114876 TGTTTGCTTGTGAAGGTTCGAAACAGCTATACGAGCAGCAAGAATGGCGTAGTCTGGATG 114817 Query 63886 TTGTGTAGT 63894 | ||||| Sbjct 114816 TGTGGTAGT 114808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633624087520400