Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576715.1_202016-02-26] 999 sequences; 36,329,774 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq76 105 1e-17 seq28 98.7 2e-15 seq34 89.7 1e-12 >seq76 Length=137558 Score = 105 bits (116), Expect = 1e-17 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 243526 GAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTC 243585 || ||||| ||| | |||||| |||| ||| ||| ||||||||||||| | | Sbjct 106099 GAGAAGGAGTTCCTGACTGACGCTCTTCCTTGCGCTCTTCTTGGCATGAACTCCAACTTG 106040 Query 243586 ATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAA 243645 ||| | |||||||| || ||||| |||||||| | | |||| ||||| | | || Sbjct 106039 ATGTGCCAGTACATTGAGTTCGTCGCCGACCGTCTCCTGGTCGCTCTTGGCAACAACAAG 105980 Query 243646 GTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACT 243705 | ||| | | ||||| |||| ||| ||||| ||| || || || || || Sbjct 105979 TACTTCAATGCAACCAACCCATTTGACTTCATGGACAACATCTCCCTGGCCGGTAAGACC 105920 Query 243706 AACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGCCCTGGTGTGATG 243753 ||||||||||| ||||||||| ||||||| || ||||||||||| Sbjct 105919 AACTTCTTCGAGAAGCGTGTCGGTGATTACCAGAAAGCTGGTGTGATG 105872 >seq28 Length=212506 Score = 98.7 bits (108), Expect = 2e-15 Identities = 244/365 (67%), Gaps = 4/365 (1%) Strand=Plus/Minus Query 298087 GATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATT-TCTAGAAGATTAGGGAAACAGC 298145 ||| ||||||||||||| | | |||| | || || || | ||| | || | || Sbjct 76338 GATGGGCGTGATGAACTCGATGAGGAACTCGGGGATCCTCAACAAGCTCGGGAATTGGGC 76279 Query 298146 TATGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTCA 298205 | || |||||||| |||| | ||| ||||||| || ||| |||| ||||||| Sbjct 76278 T-TGCAAAAAGTTAATGAGCAAACCCTTGATGTGAGAACCATCATGATCCTGATCGGTCA 76220 Query 298206 TGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTTTACCGGTTTGAA 298265 ||||||||| ||| || ||||| ||| || || |||| |||| | || | Sbjct 76219 TGATCATCAGATGTCCATAACGCAGCCCACGGGTATCCGTGTATTCTTTCTTGTGCTGCA 76160 Query 298266 GGCCGAGAATTTGTTTGA-GCGCTGTGATTTCTTCGTTCTTCGTGATGCTTGCCACGGAT 298324 || || | | ||||| | ||| ||||||| ||||||||| ||| | | | | Sbjct 76159 ACCCAAGGAAGTTTTTGATGTTCTG-GATTTCTGCGTTCTTCGAGATCTGTTCGAAAGTG 76101 Query 298325 GCATCGCGGACATTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGCGACCG 298384 ||||| ||||| |||| || ||||| || || ||||| || ||| | || ||||| Sbjct 76100 GCATCACGGACGTTCAGCAGCTTTCCTCGGAGGGGGAAAACACCAAAGAGATCCGGACCG 76041 Query 298385 ACCACGGACAGCCCTGCGATTGCAAGTGTCGCTGCGGAATCCCCCTCCGTCAGAATGAGA 298444 ||||| | | || || || || || | ||||| || || || |||||||| || Sbjct 76040 ACCACCGCACGTCCAGCCATGGCCAGACCCTTGGCGGAGTCACCTTCTGTCAGAATCAGT 75981 Query 298445 GTGCA 298449 ||||| Sbjct 75980 GTGCA 75976 >seq34 Length=185343 Score = 89.7 bits (98), Expect = 1e-12 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 334143 TCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGACCG 334202 ||||| || ||||| |||| || | ||||| |||||| || |||||||| || Sbjct 55766 TCGTGCTCAACGTAGACAGTCTTGACCTCATCCTTCTTGGGGAAACCCTCAAGCTGCTCG 55707 Query 334203 TTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAG 334262 || ||||| ||||| ||||| | ||||| | ||||| || || |||||||| Sbjct 55706 TTGTTGATAGCACGCATGAGAGTGGTCTTACCAGTACCGTTGGGACCGAGGAGACCGTAA 55647 Query 334263 CGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAATTTTTCCACCATATGCC 334322 || | ||||||||||| || | || | |||||| | || || ||||||| ||| Sbjct 55646 CGCTGACCACGCTTCAGGCGGAGATGGGTCTGGTTCAGCAAGATCTTGGCACCATAGGCC 55587 Query 334323 AGAGAAAATTCACAATCACACAGATCCTCACC 334354 || || || || | |||||||||||||| Sbjct 55586 AGGGAGAACGTGCAGTTGCACAGATCCTCACC 55555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102865883480650