Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576715.1_202016-02-26] 999 sequences; 36,329,774 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq20 125 7e-24 >seq20 Length=227818 Score = 125 bits (138), Expect = 7e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || ||||| || ||||||||||| | | ||||| | ||||| |||||||||||| Sbjct 198716 GTAGACTCTTTCTGGATGTTGTAATCGGACAAAGTGCGGCCATCTTCGAGCTGCTTGCCG 198657 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || ||||||| ||||||||||| ||||||||||| ||||| ||||| || ||| ||| Sbjct 198656 GCGAAAATGAGACGCTGCTGGTCAGGAGGAATTCCCTCTTTATCTTGAATCTTTGACTTC 198597 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | || || | || || || | || | ||||| ||||| | ||| Sbjct 198596 ACATTATCGATCGTGTCGGATGATTCAACCTCCAGCGTAATTGTCTTTCCGGTGAGAGTC 198537 Query 64427 TTTACGAAAATTTGCAT 64443 || |||||||| ||||| Sbjct 198536 TTGACGAAAATCTGCAT 198520 Score = 84.2 bits (92), Expect = 2e-11 Identities = 132/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || || || | || || || || || ||||| || || | || ||| || | || Sbjct 198202 AAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGAGAGGGTACGGCCATC 198143 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 |||||||||||||| || | || || ||||||||||| |||||||| ||||| || || Sbjct 198142 CTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTATC 198083 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||| || || | || || | | || || || | ||| | ||| Sbjct 198082 CTGAATCTTGCTCTTGACGTTGTCGATAGTGTCGCTCGACTCGACCTCCAAAGTGATGGT 198023 Query 64411 CTTGCCGGT 64419 ||||||||| Sbjct 198022 CTTGCCGGT 198014 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || ||||| | || || | || | || ||||| || ||||||||||| || | Sbjct 198519 ACCACCACGCAAGCGCAGAACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCCGA 198460 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || |||| || |||||||| || || | || | |||||||||||||| || Sbjct 198459 CAGAGTACGACCGTCCTCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCGGGGGG 198400 Query 64336 AATTCCTTCTTTTTCTTGTATTTT 64359 ||| |||||||| || || ||||| Sbjct 198399 AATGCCTTCTTTGTCCTGGATTTT 198376 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 || || ||||| ||||| |||| || ||||| | || || ||||||||||| ||| | Sbjct 198938 TCCTTCTGAATATTGTAGTCTGAGAGCGTGCGTCCATCCTCTAGCTGCTTGCCAGCAAAG 198879 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 || || || |||||||| || ||||| || || || ||||| || ||| ||| || Sbjct 198878 ATAAGACGTTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGGATCTTTGACTTGACGTTG 198819 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | || || | || ||||| | || | |||||||| || | || || ||| Sbjct 198818 TCGATAGTGTCCGAGCTTTCAACTTCCAAGGTGATAGTCTTGCCAGTGAGCGTCTTAACG 198759 Query 64433 AAAATTTGCAT 64443 || || ||||| Sbjct 198758 AAGATCTGCAT 198748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499638560685560