Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576715.1_202016-02-26] 999 sequences; 36,329,774 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq288 100 5e-15 seq41 91.5 2e-12 >seq288 Length=40287 Score = 100 bits (110), Expect = 5e-15 Identities = 91/115 (79%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 |||||||||||||| ||||| ||| || || ||| | || ||||||||||| || || Sbjct 18464 GCCGCCAACTACCTTGACATTAAGGGACTACTTGATGTTGGCTGCAAGACCGTTGCGAAT 18523 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 | |||||||||||||| || ||||| || || |||||||| || ||| || ||| Sbjct 18524 ATGATCAAGGGCAAGTCTCCTGAGGAGATTCGTAAGACCTTCAATATCCAGAACG 18578 >seq41 Length=173186 Score = 91.5 bits (100), Expect = 2e-12 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 2071800 CAGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCG 2071859 || ||| || |||||| || || ||||| | |||||||||| | | || || Sbjct 115683 CAAGCCAGGGGCCTCGTTAGGACAGAAGAGAGTCCAGTCGCCGTTGGCTTCAACTCGCTT 115624 Query 2071860 CATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTT 2071919 ||| |||| ||| ||||| ||| | || ||||||||||| || | ||||| || Sbjct 115623 CATGAACAAGTCCGGAGTCCAGAGGGCATAGAAGAGATCGCGGGCTCTCACTTCCTCTTT 115564 Query 2071920 GCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTA 2071979 ||||||||||| || ||||| | |||| || ||||||||||| ||||||| ||| Sbjct 115563 ACCGTGGTTCTTGCGGAGATCGAGGAACTCGAAGACATCGGCGTGCCAAGGCTCCAAGTA 115504 Query 2071980 GCAGGCAAAGGCGCC 2071994 |||||| || || Sbjct 115503 AATGGCAAAAGCACC 115489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916140131813561