Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576715.1_202016-02-26]
999 sequences; 36,329,774 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq20 116 3e-21
seq60 91.5 1e-13
>seq20
Length=227818
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | | ||||| || || ||| ||| || || ||||||||||||| |
Sbjct 198746 CCACCACGAAGACGGAGGACCAAGTGCAATGTAGACTCTTTCTGGATGTTGTAATCGGAC 198687
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| || || | || || |||||||| || || || || | ||||||||||| | ||||
Sbjct 198686 AAAGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGGTCAGGAGGA 198627
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | ||| || || |||||| ||||| | | | | ||||||| ||||| |||
Sbjct 198626 ATTCCCTCTTTATCTTGAATCTTTGACTTCACATTATCGATCGTGTCGGATGATTCAACC 198567
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||| ||| || || || || || | ||| || || || ||||||||
Sbjct 198566 TCCAGCGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAAATCTGCAT 198520
Score = 107 bits (118), Expect = 2e-18
Identities = 156/217 (72%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| || | || ||||| || | ||| ||||| ||||||||||| || | |
Sbjct 198518 CCACCACGCAAGCGCAGAACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCCGAC 198459
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || |||| || ||||||||||| || || ||||| ||||||||||| | |||
Sbjct 198458 AGAGTACGACCGTCCTCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCGGGGGGA 198399
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCT-TCAGAGTTG-CCACCGTGTCGCTCGATTCCA 35687
| || || |||||| || ||||||| | | |||| | | || ||||| || || |
Sbjct 198398 ATGCCTTCTTTGTCCTGGA--TTTTGCTCTTAACGTTGTCGATGGTATCGCTTGACTCAA 198341
Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
|||| | ||||| || || || || | || |||||
Sbjct 198340 CCTCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTCAC 198304
Score = 100 bits (110), Expect = 3e-16
Identities = 165/234 (71%), Gaps = 8/234 (3%)
Strand=Plus/Minus
Query 35507 TTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCG 35566
||||||||||| | | || ||||| ||||| || |||||||| ||||| ||||| ||
Sbjct 198977 TTTCCACCACGGAGACGCAGGACCAAGTGTAAGGTGCTCTCCTTCTGAATATTGTAGTCT 198918
Query 35567 GCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAA 35626
| | || || | || || |||||||| || ||||| || | || |||||||| |
Sbjct 198917 GAGAGCGTGCGTCCATCCTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGG 198858
Query 35627 GGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGA 35682
|||| | ||||||||| ||||||| ||| | |||| | | ||||| |||
Sbjct 198857 GGAATACCCTCCTTGTCTTGGATCTTTGACTTGA-CGTTGTCGATAGTGTCCGAGCT--- 198802
Query 35683 TTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||| || |||| ||||| || || || || | || || || || ||||||||
Sbjct 198801 TTCAACTTCCAAGGTGATAGTCTTGCCAGTGAGCGTCTTAACGAAGATCTGCAT 198748
Score = 86.0 bits (94), Expect = 6e-12
Identities = 122/169 (72%), Gaps = 2/169 (1%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || ||||| || || | | ||| || | || || |||||||| || || ||
Sbjct 198181 CTCCTTCTGGATGTTATAGTCAGAGAGGGTACGGCCATCCTCAAGCTGCTTGCCAGCGAA 198122
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| ||||||||||| | ||||| || ||||| ||| ||||| ||| | ||
Sbjct 198121 GATCAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTGAATCTTGCTCTTGAC-GT 198063
Query 35665 TGCC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712
|| | | ||||||||||| || ||||||| ||||| || || || ||
Sbjct 198062 TGTCGATAGTGTCGCTCGACTCGACCTCCAAAGTGATGGTCTTGCCGGT 198014
>seq60
Length=151611
Score = 91.5 bits (100), Expect = 1e-13
Identities = 122/167 (73%), Gaps = 2/167 (1%)
Strand=Plus/Plus
Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606
|||| || |||||||| ||| || ||| || | || || ||||||||||| || || |
Sbjct 81343 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCGGCGAAGA 81402
Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666
||| ||||||||||| | || | | |||||||||| |||||| ||| | ||||
Sbjct 81403 TCAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTG 81461
Query 35667 -CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712
| | ||||||||||| || || || | || || || ||||||||
Sbjct 81462 TCGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGT 81508
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450787970714920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |