Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576715.1_202016-02-26] 999 sequences; 36,329,774 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq20 116 3e-21 seq60 91.5 1e-13 >seq20 Length=227818 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||| || || ||| ||| || || ||||||||||||| | Sbjct 198746 CCACCACGAAGACGGAGGACCAAGTGCAATGTAGACTCTTTCTGGATGTTGTAATCGGAC 198687 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || || |||||||| || || || || | ||||||||||| | |||| Sbjct 198686 AAAGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGGTCAGGAGGA 198627 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||| || || |||||| ||||| | | | | ||||||| ||||| ||| Sbjct 198626 ATTCCCTCTTTATCTTGAATCTTTGACTTCACATTATCGATCGTGTCGGATGATTCAACC 198567 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| ||| || || || || || | ||| || || || |||||||| Sbjct 198566 TCCAGCGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAAATCTGCAT 198520 Score = 107 bits (118), Expect = 2e-18 Identities = 156/217 (72%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| || | || ||||| || | ||| ||||| ||||||||||| || | | Sbjct 198518 CCACCACGCAAGCGCAGAACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCCGAC 198459 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || |||| || ||||||||||| || || ||||| ||||||||||| | ||| Sbjct 198458 AGAGTACGACCGTCCTCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCGGGGGGA 198399 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCT-TCAGAGTTG-CCACCGTGTCGCTCGATTCCA 35687 | || || |||||| || ||||||| | | |||| | | || ||||| || || | Sbjct 198398 ATGCCTTCTTTGTCCTGGA--TTTTGCTCTTAACGTTGTCGATGGTATCGCTTGACTCAA 198341 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 |||| | ||||| || || || || | || ||||| Sbjct 198340 CCTCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTCAC 198304 Score = 100 bits (110), Expect = 3e-16 Identities = 165/234 (71%), Gaps = 8/234 (3%) Strand=Plus/Minus Query 35507 TTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCG 35566 ||||||||||| | | || ||||| ||||| || |||||||| ||||| ||||| || Sbjct 198977 TTTCCACCACGGAGACGCAGGACCAAGTGTAAGGTGCTCTCCTTCTGAATATTGTAGTCT 198918 Query 35567 GCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAA 35626 | | || || | || || |||||||| || ||||| || | || |||||||| | Sbjct 198917 GAGAGCGTGCGTCCATCCTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGG 198858 Query 35627 GGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGA 35682 |||| | ||||||||| ||||||| ||| | |||| | | ||||| ||| Sbjct 198857 GGAATACCCTCCTTGTCTTGGATCTTTGACTTGA-CGTTGTCGATAGTGTCCGAGCT--- 198802 Query 35683 TTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| || |||| ||||| || || || || | || || || || |||||||| Sbjct 198801 TTCAACTTCCAAGGTGATAGTCTTGCCAGTGAGCGTCTTAACGAAGATCTGCAT 198748 Score = 86.0 bits (94), Expect = 6e-12 Identities = 122/169 (72%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||| || || | | ||| || | || || |||||||| || || || Sbjct 198181 CTCCTTCTGGATGTTATAGTCAGAGAGGGTACGGCCATCCTCAAGCTGCTTGCCAGCGAA 198122 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||| | ||||| || ||||| ||| ||||| ||| | || Sbjct 198121 GATCAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTGAATCTTGCTCTTGAC-GT 198063 Query 35665 TGCC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712 || | | ||||||||||| || ||||||| ||||| || || || || Sbjct 198062 TGTCGATAGTGTCGCTCGACTCGACCTCCAAAGTGATGGTCTTGCCGGT 198014 >seq60 Length=151611 Score = 91.5 bits (100), Expect = 1e-13 Identities = 122/167 (73%), Gaps = 2/167 (1%) Strand=Plus/Plus Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606 |||| || |||||||| ||| || ||| || | || || ||||||||||| || || | Sbjct 81343 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCGGCGAAGA 81402 Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666 ||| ||||||||||| | || | | |||||||||| |||||| ||| | |||| Sbjct 81403 TCAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTG 81461 Query 35667 -CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712 | | ||||||||||| || || || | || || || |||||||| Sbjct 81462 TCGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGT 81508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450787970714920