Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576715.1_202016-02-26] 999 sequences; 36,329,774 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq255 104 2e-17 >seq255 Length=46148 Score = 104 bits (114), Expect = 2e-17 Identities = 400/634 (63%), Gaps = 29/634 (5%) Strand=Plus/Minus Query 29622 TGGGCTCCCTCTCGAGCTGAATCCT-CAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCA 29680 ||||||||||| | ||||| |||| || || || || ||||| |||||||| || | | Sbjct 23042 TGGGCTCCCTCACCAGCTGC-TCCTGCAAGGGCTCGACATGGTCCAGGTAGACATGGGTA 22984 Query 29681 TCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTAC 29740 || |||| || || ||||| || || | || | | | ||||| ||||| | Sbjct 22983 TCACCCATGGCATGAACAAAGGTACCGGGATGCAGGTCCGCAGCATGAGCAATCATATGG 22924 Query 29741 GTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTC 29800 || | ||| | |||| ||| || || || ||||| ||||| | | ||| | || | | Sbjct 22923 GTCAAGAGGGCGTAGGAGGCAATATTGAACGGCACGCCGAGGGCGACGTCACACGAGCGC 22864 Query 29801 TGGTAGAGCTGGCAC--GAGA----------GCTCT---CC------GTCGCTCACGTAA 29839 |||||||||||||| |||| | ||| || || | ||||| Sbjct 22863 TGGTAGAGCTGGCAGTGGAGATGACCCTTCTGGTCTTGGCCATTGGGGTAGGAGACGTAG 22804 Query 29840 AACTGAC---ACATGGCATGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTTGGGGTTC 29896 ||||| |||| ||| || || || |||||||| | || ||||||| Sbjct 22803 AACTGGGCGAACAT---ATGACAAGGCGGGAGGGCCATCTTCTTGAGATCGGCGGGGTTC 22747 Query 29897 CAGGCACACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTT 29956 ||||| | || ||||||||| | ||| ||||| ||| | | || |||| | | Sbjct 22746 CAGGCGCTCATGATGATGCGGCGGTCGAAGGGGTTATTCTTCAGCTTGTGCACGACCTCG 22687 Query 29957 TGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGNNNNNNNNNNNNNNNNNNNNNNNNCG 30016 ||||| || || || |||| |||||| | || Sbjct 22686 GCGAGCTGGTCAACGCCTTGTCCCGTGTAGTCGGTTTTGGCGTCGACGTACTCGGCCCCG 22627 Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076 || || | ||| |||||||||||||| || ||||| || || | || | ||| || | | Sbjct 22626 AAGTGGCGCCATTGGAACCCGTACACGGGACCCAGATCGCCGACCTCGCGGTGGTCCAGG 22567 Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136 || |||||| | || || | | |||||| ||||||||||||| || || | ||| Sbjct 22566 CCGAYCTTGTCGAGGAACTCACGGCTGCCGTTGCCGTCCCAGATCTTGACGCCTTGGTCG 22507 Query 30137 GAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCC 30196 |||||| ||| ||| | || || |||||| ||||| || | |||||||| Sbjct 22506 GAGAGCGGCAGGGATGAGGTGCAGCCGGAGATGAACCAGAGCAGTTCGGCGACGACGGCG 22447 Query 30197 TTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAA 30230 ||||| | |||||| || ||||| | || Sbjct 22446 CGGAGGAAGACGCGCTTGGTGGTCAGGAGSGTAA 22413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406158254836114