Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576725.1_202016-02-26] 999 sequences; 36,203,959 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq9 125 2e-23 seq167 93.3 9e-14 >seq9 Length=276411 Score = 125 bits (138), Expect = 2e-23 Identities = 169/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 230410 GAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC-CTTATTGGCATGAACGCTGAACT 230468 || ||||||||| | ||||||| |||| || ||| ||| ||||||||||| | |||| Sbjct 244927 GAGAAGGAGTTCCTGACTGACGCTCTTCCTTG-CGCTCTTCTTGGCATGAACTCC-AACT 244870 Query 230469 T-ATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGA 230527 | ||| | |||||||| || ||||| |||||||| | | || || ||||| || | | Sbjct 244869 TGATGTGCCAGTACATTGAGTTCGTCGCCGACCGTCTCCTGGTCGCTCTTGGCAACAACA 244810 Query 230528 AAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGA 230587 | | ||| | | ||||| |||| || ||||| ||| || || || |||| Sbjct 244809 AGTACTTCAATGCCACCAACCCATTTGACTTCATGGACAACATCTCCCTGGCCGGTAAGA 244750 Query 230588 CCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 ||||||||||||| ||||||||| |||| || |||| ||||||||||| Sbjct 244749 CCAACTTCTTCGAGAAGCGTGTCGGTGATTACCAGAAAGCTGGTGTGATG 244700 >seq167 Length=78171 Score = 93.3 bits (102), Expect = 9e-14 Identities = 432/671 (64%), Gaps = 30/671 (4%) Strand=Plus/Minus Query 281532 CGCTTCACGTTGTCTACGATGTCTTTGGGATTATAACTGGGAATGTTAGTAGACCAACCG 281591 ||||| | |||||| |||||||| | ||| || || | || ||| | | ||| ||| Sbjct 19026 CGCTTAAGGTTGTCCACGATGTCCTCGGGGTTGTAGTTAGGGATGGATGAACTCCAGCCG 18967 Query 281592 GTTCCAATACCACTTGAACCATTTACCAAAATACTCGGGATAATAGGTACATAACATTCT 281651 || || ||||| | ||| || |||| || | || | | || || || ||| Sbjct 18966 GTGCCGATACCGTCAGCACCGTTAACCAGGATCATGGGAACGACGGGCACGTAGATTTCC 18907 Query 281652 GGTTCAATTTTATCACCATCATCATACAAATACTTCAGAAGGTTATCATCTGTATCGACG 281711 || || ||||| ||||||||||| | || | || || |||||| | | | Sbjct 18906 GGCTCGATTTTTTCACCATCATCCTCGTTGTAAGTAAGTAGAGGATCATCATGAGCATGG 18847 Query 281712 AAAACCTGTCGCGTCTTAGGGTTCAGTTTCGTGAAGATATACCTTGCACTCGCGTGGTCT 281771 || || |||| | || ||| ||| ||||||| | ||||| || |||| Sbjct 18846 AAGACACGTCGAGCGAACGGCGACAGGCGAGTGTAGATATAACGAGCACTGGCACAGTCT 18787 Query 281772 TTACCACCCTGCAGCCTCGAC--CCAAACTGACCCTCCGGCAACAACCAGTTAATGTTAT 281829 |||||||| || | ||| ||||| | ||| ||| || ||||| | || | Sbjct 18786 GATCCACCCTGGAGAC--GACTACCAAAGTTACCACTGGGCTCCAGACAGTTTACATTGT 18729 Query 281830 TGCTCCCGACGTAATCCTGAGCCAGGTTGACGATTGTCCCCTGAAGCGATACCTCACCGT 281889 || ||||||| | ||| |||||| |||||| ||| ||| || || | ||||||| Sbjct 18728 TGGACCCGACGAAGCTCTGTGCCAGGCCGACGATGGTCTGCTGCAGGGAGATGTCACCGT 18669 Query 281890 GGTGATAGGCGCTGTGTT--CGGCAACATAACCACTGAACTGTGCTACCTTCACGTCTGA 281947 | ||||| ||| || | | | ||| | ||| || | | ||||||| || Sbjct 18668 GTTGATA--CGCAGTCATACCCGAAACGTGACCCGCTAATTCGACCACCTTCATATCCTT 18611 Query 281948 TGTCAAGTTGCGTTTGAAAGCGCAA-TATAAT--ACTTTTCGTTGAGAAGGCTTGAAACC 282004 ||| ||||||| |||| ||| ||||| || || |||||| ||||||| || Sbjct 18610 CTTCAGGTTGCGTCGGAAA---CAAGTATAAAGAACCTTACGTTGACCGGGCTTGAGGCC 18554 Query 282005 ATCAACGACAGACGGAATGCTGCGTTCCAGGTCATA--CCGCGA----GAACAAAATAAG 282058 ||| ||||| || ||||| || || || ||| |||| | ||| | || || Sbjct 18553 ATCCACGACCGAAGGAAT----CGATC--GGACATTGTCCGCCATACTGAATAGGATGAG 18500 Query 282059 TTCCTTGTCAATGAAGTCGGGAACGGGAACCTCGGGCTTCTTGTGGTC-AAGTTGGTTTC 282117 ||||||| |||||||||| | || || || | ||| || ||| |||| | Sbjct 18499 CTCCTTGTTGATGAAGTCGGTGTATGAAATCTTGGACACTGAGTGATCCAAGAAGGTT-C 18441 Query 282118 CCGGCTCGTAT-GCCGTCATCCACTCCTTGCGATCCTCGGCCCGAGTCTTGTTGAAAGAA 282176 |||||| | || | || || |||||||||||| || |||||| ||||| ||||| | Sbjct 18440 CCGGCTTGAATTGACG-CAGCCACTCCTTGCGCTCATCGGCCTTCTTCTTGGAGAAAGCA 18382 Query 282177 CGATCGATGAG 282187 | || || || Sbjct 18381 AGCTCAATCAG 18371 Score = 89.7 bits (98), Expect = 1e-12 Identities = 209/307 (68%), Gaps = 10/307 (3%) Strand=Plus/Minus Query 282456 TGGAAAAAGTTCATGACAAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTCATG 282515 || |||||||| |||| | ||| ||||||| || ||| |||| ||||||||| Sbjct 18084 TGCAAAAAGTTAATGAGCAAACCCTTGATGTGAGAACCATCATGATCCTGATCGGTCATG 18025 Query 282516 ATCATCACATGACCGTATCTCAGAGAAGAAGTGTCTTTGTACACTTTACCGGTTTGAAGG 282575 ||||||| ||| || || | ||| | || || |||| |||| | || | | Sbjct 18024 ATCATCAGATGTCCATAACGCAGCCCACGGGTATCCGTGTATTCTTTCTTGTGCTGCA-G 17966 Query 282576 CCCAA--AATTTGTTTGA-GCGCGGTGATTTCTTCGTTCTTTGTGATACTTGCCACAGAT 282632 ||||| || || ||||| | | | ||||||| ||||||| | ||| | | | || Sbjct 17965 CCCAAGGAAGTT-TTTGATGTTCTG-GATTTCTGCGTTCTTCGAGATCTGTTCGAAAGTG 17908 Query 282633 GCATCGCGAACGTTCAGCAACTTACCGCGGAGAGGAAAAACACCATATCTCTCGCGACCG 282692 ||||| || |||||||||| ||| || ||||| || ||||||||| | || ||||| Sbjct 17907 GCATCACGGACGTTCAGCAGCTTTCCTCGGAGGGGGAAAACACCAAAGAGATCCGGACCG 17848 Query 282693 ACCACGGACAGTCCTGCAATTGCAAG--TGTTGCTGCGGAATCTCCCTCCGTCAAGATGA 282750 ||||| | |||| || || || || ||| ||||| || || || |||| || | Sbjct 17847 ACCACCGCACGTCCAGCCATGGCCAGACCCTTG--GCGGAGTCACCTTCTGTCAGAATCA 17790 Query 282751 GAGTACA 282757 | || || Sbjct 17789 GTGTGCA 17783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057810460183370