Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576725.1_202016-02-26] 999 sequences; 36,203,959 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq16 214 2e-50 >seq16 Length=224152 Score = 214 bits (236), Expect = 2e-50 Identities = 602/911 (66%), Gaps = 19/911 (2%) Strand=Plus/Minus Query 63189 TCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGAC 63248 || || ||||| || |||||| | |||| | ||| || | ||||| | | | | Sbjct 166745 TCAAATTCGTCACCATAAACATCGGCCAAGCCAGGGGCCTCGTTAGGACAGAAGAGAGTC 166686 Query 63249 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 63307 || || |||| | | ||||| ||||| || | || ||| |||| || || ||| || Sbjct 166685 CAGTCGCCGTTGGCTTCAACTCGCTTCATGAACAAGTCCGGAGTCCAGAGGGC-ATAGAA 166627 Query 63308 TAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63367 ||||| | | ||| |||||| || || ||||| |||||||||||| | | Sbjct 166626 GAGATCGCGGGCTCTCACTTCCTCTTTACCGTGGTTCTTGCGGAGATCGAGGAACTCGAA 166567 Query 63368 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63427 | ||| | ||||| || |||||||| ||||| | | | || || || ||||||||||| Sbjct 166566 GACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCACCTGGACGCTTGTTTCCTCC 166507 Query 63428 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63487 ||| |||| ||||| || ||||| || | || | | ||| |||| |||||| || || Sbjct 166506 CTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATGGGAACAATACCATTGGA 166447 Query 63488 TATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAAT--ATTACTAATTGATAGA 63545 ||| |||||||| || ||| || | ||||| || | | |||| ||| Sbjct 166446 GGAACCGTTGGTACCACCAATGTAGGAGCCGGTAGCACGGATGCGGTGCACATTG--AGA 166389 Query 63546 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCT 63605 || ||||| || || | || ||||| ||||| ||| || | ||||||||| || ||| Sbjct 166388 CCGATTCCACCAGCGGTCTTCGAGATCAATGCACATGTCTTGAGCGTGTCATAAATACCT 166329 Query 63606 TCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTT 63665 || |||||||| || |||| | | ||||| || || | || | ||| || Sbjct 166328 TCGATGCTATCCTCCTTCATATCGACAAGAAAGCATGAAGCAAGCTGAGGCTGAGGGGTA 166269 Query 63666 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 63725 || ||||| || || || || || || || || || | || | ||| | | | || Sbjct 166268 CCAGCATTGAACAAAGTCGGCGAGGCATGGGTGAAATACTTCTGAGACATCAAGTGATAG 166209 Query 63726 GTCTCAATAGCTGAGTCTATATCCCATT--GATGAATTCCTACTGCGACACGCATTAACA 63783 ||||| ||||| ||| || |||| |||||| || || | ||||||||| || | Sbjct 166208 GTCTCGATAGC--CTTCTCAATGTCATTACCATGAATACCAACAGAGACACGCATCAAAA 166151 Query 63784 TGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAA-CAAGTAGGATTTTTCCAA- 63841 ||||||||| | |||| ||| || | |||| || ||||||||| |||| Sbjct 166150 GGTGCTGAGGACGTTCAGCAACCTT-TCCATTATACCGAATCAAGTAGGA--CCCCCAAT 166094 Query 63842 AGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAATTG 63899 ||| || || || ||| ||||||| ||||| || || ||||| | |||| | || ||| Sbjct 166093 AGTCTTGAAGCCGAAAAAGTTGTAGTTGAAA--TCGCGGTCGTACACAATAGCGGAGTTG 166036 Query 63900 AGCTTATCCTTATATTTGTTAACTATATCCATGGTAATACTTGAAATAATCGGAGAATGT 63959 || | || || ||| | ||||| || || |||| || || || | | || Sbjct 166035 AGTTCGTCGGCATGTTTCATGACTATCTCGTACGTTTCCTTTGATATCATTGGGGCAGGT 165976 Query 63960 TTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttt 64019 ||| ||| || || || | || | | ||| || || || ||| | || Sbjct 165975 TTCTTATTCTTTGGGTTGATGTAATGGTATAGGTCTGAAATAACCAGGGAGAATTGCTTC 165916 Query 64020 tttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGA 64079 ||||||| |||||| || || || | ||||| | || || |||||||| || || ||| Sbjct 165915 TTTGTTTGCTTGTGAAGGTTCGAAACAGCTATACGAGCAGCAAGAATGGCGTAGTCTGGA 165856 Query 64080 TGTTGTGTAGT 64090 ||| ||||| Sbjct 165855 TGTGTGGTAGT 165845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629809735152720