Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576725.1_202016-02-26] 999 sequences; 36,203,959 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq61 188 1e-43 seq271 187 4e-43 >seq61 Length=143188 Score = 188 bits (208), Expect = 1e-43 Identities = 192/248 (77%), Gaps = 2/248 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||||| | || || |||||||| || ||||| ||||| |||| Sbjct 5367 CGCCAAGCGTCACCGCAAGATCT-TGCGTGACAACATCCAGGGTATCACTAAGCCCGCTA 5425 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||||||||| |||||||||||||| ||||||||| |||||| || |||| || |||| Sbjct 5426 TCCGTCGTCTTGCTCGTCGTGGTGGTGTCAAGCGTATCTCTGCCATGATCTACGAGGAGA 5485 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 |||| ||| | |||| |||||| || || |||| ||| ||| || ||| || | Sbjct 5486 CCCGTGGTGTCCTCAAGACCTTCCTTGAGGGTGTCATCCGTGACGCTGTCACCTACACTG 5545 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || ||||| ||||| || | || |||||||||| | || ||||||| Sbjct 5546 AGCACGCCAAGCGCAAGACCGTCACTTCTCTTGACGTCGTCTATGCCCTCAAGCGTCAAG 5605 Query 16671 GCCGTAAG 16678 | ||| || Sbjct 5606 GACGTGAG 5613 >seq271 Length=41802 Score = 187 bits (206), Expect = 4e-43 Identities = 200/262 (76%), Gaps = 2/262 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||||| | || || |||||||| || ||||| ||||| || | Sbjct 33897 CGCCAAGCGTCACCGCAAGATCT-TGCGTGACAACATCCAGGGTATCACTAAGCCCGCCA 33839 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||||||||| ||||| |||||||| ||||||||| |||| | || |||| || |||| Sbjct 33838 TCCGTCGTCTCGCTCGCCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTACGAGGAGA 33779 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 ||||| |||| | ||| |||||| || |||| || | |||||| | ||| |||| Sbjct 33778 CTCGTGGTGTTCTCAAGTCCTTCCTTGAGTCCGTCATTCGTGATGCCGTTACCTACACCG 33719 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || |||||||| |||||||| |||| | ||||| || | || || || | Sbjct 33718 AGCACGCCAAGCGTAAGACCGTCACCTCGCTGGACGTGGTCTACGCCCTCAAGCGCCAGG 33659 Query 16671 GCCGTAAGATTTATGGTTTTGG 16692 |||||| | || ||||| || Sbjct 33658 GCCGTACCCTCTACGGTTTCGG 33637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074286607307