Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576725.1_202016-02-26] 999 sequences; 36,203,959 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq16 232 8e-56 >seq16 Length=224152 Score = 232 bits (256), Expect = 8e-56 Identities = 606/911 (67%), Gaps = 19/911 (2%) Strand=Plus/Minus Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197 || || ||||| || |||||| | |||| ||||| || | ||||| | | | | Sbjct 166745 TCAAATTCGTCACCATAAACATCGGCCAAGCCAGGGGCCTCGTTAGGACAGAAGAGAGTC 166686 Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 63256 || || |||| | | ||||| ||||| || | || ||| |||| || || ||| || Sbjct 166685 CAGTCGCCGTTGGCTTCAACTCGCTTCATGAACAAGTCCGGAGTCCAGAGGGC-ATAGAA 166627 Query 63257 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63316 ||||| | || ||| |||||| || || ||||| |||||||||||| | | Sbjct 166626 GAGATCGCGGGCTCTCACTTCCTCTTTACCGTGGTTCTTGCGGAGATCGAGGAACTCGAA 166567 Query 63317 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63376 | ||| | ||||| || |||||||| ||||| | | | || || || ||||||||||| Sbjct 166566 GACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCACCTGGACGCTTGTTTCCTCC 166507 Query 63377 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63436 ||| |||| ||||| || ||||| || | || | | ||| |||| |||||| || || Sbjct 166506 CTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATGGGAACAATACCATTGGA 166447 Query 63437 TATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGA 63494 ||| |||||||| || ||| || | ||||| || | | |||| ||| Sbjct 166446 GGAACCGTTGGTACCACCAATGTAGGAGCCGGTAGCACGGATGCGGTGCACATTG--AGA 166389 Query 63495 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCC 63554 || ||||| || || | || ||||| ||||| ||| || | ||||||||| ||||| Sbjct 166388 CCGATTCCACCAGCGGTCTTCGAGATCAATGCACATGTCTTGAGCGTGTCATAAATACCT 166329 Query 63555 TCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 63614 || |||||||| || |||| | | ||||| || || | || | || || Sbjct 166328 TCGATGCTATCCTCCTTCATATCGACAAGAAAGCATGAAGCAAGCTGAGGCTGAGGGGTA 166269 Query 63615 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 63674 || ||||| || || || || || || || || || | || | ||| | | | || Sbjct 166268 CCAGCATTGAACAAAGTCGGCGAGGCATGGGTGAAATACTTCTGAGACATCAAGTGATAG 166209 Query 63675 GTCTCAATAGCTGAGTCTATATCCCATT--GATGAATTCCTACTGCGACACGCATTAACA 63732 ||||| ||||| ||| || |||| |||||| || || | ||||||||| || | Sbjct 166208 GTCTCGATAGC--CTTCTCAATGTCATTACCATGAATACCAACAGAGACACGCATCAAAA 166151 Query 63733 TGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAA-CAAGTAGGATTTTTCCAA- 63790 ||||||||| | |||| | | ||| | |||| || ||||||||| |||| Sbjct 166150 GGTGCTGAGGACGTTCAGCAACCTT-TCCATTATACCGAATCAAGTAGGA--CCCCCAAT 166094 Query 63791 AGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTG 63848 ||| || || || ||| ||||||| ||||| || || ||||| | |||| | |||||| Sbjct 166093 AGTCTTGAAGCCGAAAAAGTTGTAGTTGAAA--TCGCGGTCGTACACAATAGCGGAGTTG 166036 Query 63849 AGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACTTGAAATAATCGGAGAATGT 63908 |||| || || ||| | ||||| || || |||| || || || | | || Sbjct 166035 AGTTCGTCGGCATGTTTCATGACTATCTCGTACGTTTCCTTTGATATCATTGGGGCAGGT 165976 Query 63909 TTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttt 63968 ||| ||| || || || | || | | ||| || || || ||| | || Sbjct 165975 TTCTTATTCTTTGGGTTGATGTAATGGTATAGGTCTGAAATAACCAGGGAGAATTGCTTC 165916 Query 63969 tttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGA 64028 ||||||| |||||| || || || || ||||| | || || |||||||| || || ||| Sbjct 165915 TTTGTTTGCTTGTGAAGGTTCGAAACAGCTATACGAGCAGCAAGAATGGCGTAGTCTGGA 165856 Query 64029 TGTTGTGTAGT 64039 ||| ||||| Sbjct 165855 TGTGTGGTAGT 165845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622939420946840