Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576725.1_202016-02-26] 999 sequences; 36,203,959 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq278 104 2e-17 seq5 100 2e-16 seq585 95.1 8e-15 >seq278 Length=40584 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 38088 TTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCA 38147 || ||||| | | ||||| ||||| || | ||||||||||| ||||||||||| || Sbjct 33657 TTTCCACCACGGAGACGCAGGACCAAGTGTAAGGTGCTCTCCTTCTGAATATTGTAGTCT 33598 Query 38148 GACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAG 38207 || | ||| | || |||| || || || ||||| || || ||||| || || | | Sbjct 33597 GAGAGCGTGCGTCCATCCTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGG 33538 Query 38208 GGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCA 38267 || | || || ||||| || ||| ||| || || | || ||| || |||||| Sbjct 33537 GGAATACCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATAGTGTCCGAGCTTTCA 33478 Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||| || || ||||| || || || | || || ||||| |||||||| Sbjct 33477 ACTTCCAAAGTGATAGTCTTGCCAGTGAGCGTCTTAACGAAGATCTGCAT 33428 Score = 95.1 bits (104), Expect = 8e-15 Identities = 154/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | ||| |||| ||||| || ||||| ||||| ||||| ||||| || | Sbjct 33200 TACCACCACGCAAGCGCAGAACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCCG 33141 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||| | ||| |||| || | || || || || || || | || || || |||| || Sbjct 33140 ACAGAGTACGACCGTCCTCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCGGGGG 33081 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | ||||||||||||| ||||| ||| || || | || ||||| | |||| Sbjct 33080 GAATGCCTTCTTTGTCCTGGATTTTGCTCTTAACGTTGTCGATGGTATCGCTTGACTCAA 33021 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATA 38310 | || | || ||||| || || || | ||| ||||||| || Sbjct 33020 CCTCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTCACGACTA 32979 >seq5 Length=341582 Score = 100 bits (110), Expect = 2e-16 Identities = 226/337 (67%), Gaps = 12/337 (4%) Strand=Plus/Minus Query 6157 CCACGATGGGGACCCTGAACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTACAAAA 6216 |||| |||| ||| | ||| | ||| |||| | || | ||||| || ||||| | Sbjct 66407 CCACCATGGCTACCGTCAACATTCGTCGGGATGTTACCGATCCCTTCTATCGTTACAAGA 66348 Query 6217 TGCCGCGCATCTGCG--CCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGT 6274 || |||| |||| ||||| ||||||| ||||| || || || || |||||| |||| Sbjct 66347 TGGAGCGC--CTGCAGTCCAAGATCGAGGGCAAGGGCAATGGAATCAAGACCGTCGTTGT 66290 Query 6275 CAACATGCCTGAA----GTCGCTAAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAAT 6330 |||| || || |||||| || | || | ||| ||| || | ||| || || | Sbjct 66289 CAAC----CTCAACTCGGTCGCTCAGTCCCTTGCACGTCCTCCCGCATACGTGATCAAGT 66234 Query 6331 ATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAGCGCTTCATCG 6390 | ||||| | ||| |||||||||||| | | | | | | || |||| ||| Sbjct 66233 ACTTCGGTTTCGAGCTTGGCGCTCAGGCCAACGCCAAGCCGACCGATGACCGCTGGATCA 66174 Query 6391 TTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTTATTCGCAAGT 6450 | ||||| | || | | |||||||| ||||| | |||||||| || ||| ||| | Sbjct 66173 TCAACGGCGCCCACGATGCCGCCAAGCTCCAGGATTATCTTGACGGATTCATTTCCAAAT 66114 Query 6451 TTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487 | || || || | | ||| | ||||| || ||||| Sbjct 66113 TCGTTCTTTGCAAGAAGTGCAAGAACCCTGAAACCGA 66077 >seq585 Length=2841 Score = 95.1 bits (104), Expect = 8e-15 Identities = 63/70 (90%), Gaps = 5/70 (7%) Strand=Plus/Plus Query 25920 GTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAATCCTTTCATGCGCGT 25974 |||||||||||||||||||||||||| || |||||||||||||| ||||||||||| Sbjct 2552 GTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGT 2611 Query 25975 CACTAATTAG 25984 |||||||||| Sbjct 2612 CACTAATTAG 2621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334943121913169