Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576725.1_202016-02-26] 999 sequences; 36,203,959 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq9 143 3e-29 seq278 107 2e-18 seq84 95.1 1e-14 >seq9 Length=276411 Score = 143 bits (158), Expect = 3e-29 Identities = 307/450 (68%), Gaps = 19/450 (4%) Strand=Plus/Minus Query 52396 AGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCA 52455 |||| | |||||||||||| || ||||| | || || ||||| ||| ||| | | Sbjct 245157 AGCGTCTCGTGGCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCCGGATCCTTCGCCTCTA 245098 Query 52456 TCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATAT 52515 |||| | | || | | ||| | |||||||| || || ||| ||||||| | || | Sbjct 245097 TCTTCTGGCTGAAGAAGCGTGGCTTGATGCCCGGTCTTACATTCTCCAACGAGCTTATCT 245038 Query 52516 CGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTGACCG 52575 | || || || || || ||||| |||||||| ||||| || | ||| | ||| | Sbjct 245037 CTCGTGATGAGGGTCTCCACACTGACTTTGCTTGCCTGCTCTTCT---CGCACCTGAAC- 244982 Query 52576 AAAAATTGGATTCGGACAC---GATCCTG-AGCATGTT--CAAGGAGGCGGTGGCTATCG 52629 || | | ||| | ||| || || | ||| | ||| || || | || | Sbjct 244981 ---AACCGCC--CCGACCCTCAGATTGTGGAGGACGTTATCGTGGAAGCTGTCTCCATTG 244927 Query 52630 AAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCA 52689 | |||||||| | || | ||| || || || || || ||||||||| | | | | Sbjct 244926 AGAAGGAGTTCCTGACTGACGCTCTTCCTTGCGCTCTTCTTGGCATGAACTCCAACTTGA 244867 Query 52690 TGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCG-GGCAGCCA-AA 52747 ||||| ||||||| ||||| || || || ||||| |||| |||| |||| | | || Sbjct 244866 TGTGCCAGTACATTGAGTTCGTCGCCGACCGTCTCCTGGTC--GCTCTTGGCAACAACAA 244809 Query 52748 GTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGAC 52807 ||||||||| || ||| || ||||| || ||| ||||||| || || | || ||||| Sbjct 244808 GTACTTCAATGCCACCAACCCATTTGACTTCATGGACAACATCTCCCTGGCCGGTAAGAC 244749 Query 52808 CAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 |||||| ||||||||||| ||||| || || Sbjct 244748 CAACTTCTTCGAGAAGCGTGTCGGTGATTA 244719 >seq278 Length=40584 Score = 107 bits (118), Expect = 2e-18 Identities = 156/217 (72%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || ||||| |||| ||| || || | | || ||||| |||||||||||||| | Sbjct 33198 CCACCACGCAAGCGCAGAACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCCGAC 33139 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| ||||||||| || ||||| | |||| | |||||| ||||| || || Sbjct 33138 AGAGTACGACCGTCCTCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCGGGGGGA 33079 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||||||||| || |||| | |||| ||| || | ||| ||| | ||||| | Sbjct 33078 ATGCCTTCTTTGTC-CTGGATTTTGCTCTTAACGTTG-TCGATGGTATCGCTTGACTCAA 33021 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 |||| | || | || || ||||| || || || || Sbjct 33020 CCTCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTCAC 32984 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||| || || |||||||| ||| || ||| || || ||||| || || |||| Sbjct 33393 GACTCTTTCTGGATGTTGTAATCGGACAAAGTGCGGCCATCTTCGAGCTGCTTGCCGGCG 33334 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 | || |||||||| ||||| ||||| || || ||||| || ||| | |||| || | Sbjct 33333 AAAATGAGACGCTGCTGGTCAGGAGGAATTCCCTCTTTATCT-TGAATCTTTGACTTCAC 33275 Query 138541 TGT-TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | ||||||| || || ||||| | ||| | || || || || ||||| || Sbjct 33274 ATTATCGATCGTGTCGGATGATTCAACCTCCAGCGTAATTGTCTTTCCGGTGAGAGTCTT 33215 Query 138600 TACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 33214 GACGAAAATCTGCAT 33200 >seq84 Length=124832 Score = 95.1 bits (104), Expect = 1e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||||||| || || ||||| || || ||||||| ||| Sbjct 44455 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCGGCGAAGA 44514 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTT 138544 | |||||||| ||||| || || ||||| || ||||| ||| || || | | | Sbjct 44515 TCAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGT 44574 Query 138545 CCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAA 138604 | | ||||||| ||||||| || |||| || | || ||||| || || || || || | Sbjct 44575 CGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACGA 44634 Query 138605 AA 138606 || Sbjct 44635 AA 44636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496256202923280