Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576725.1_202016-02-26] 999 sequences; 36,203,959 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq278 118 1e-21 seq84 114 1e-20 seq121 93.3 5e-14 >seq278 Length=40584 Score = 118 bits (130), Expect = 1e-21 Identities = 172/239 (72%), Gaps = 8/239 (3%) Strand=Plus/Minus Query 46359 ATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGT 46418 |||| || || || | | ||||| |||| || || || |||||||| || ||||||| Sbjct 33662 ATTAGTTTCCACCACGGAGACGCAGGACCAAGTGTAAGGTGCTCTCCTTCTGAATATTGT 33603 Query 46419 AGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGT 46478 |||| || || ||||| | || || ||||||||||| || || || | || ||||||| Sbjct 33602 AGTCTGAGAGCGTGCGTCCATCCTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGGT 33543 Query 46479 CGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---G 46534 | | || | | ||||||||| |||||| ||||| ||| | | | ||||| | Sbjct 33542 CTGGGGGAATACCCTCCTTGTCTTGGATCTTTGACTTGA-CGTTGTCGATAGTGTCCGAG 33484 Query 46535 CTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || ||| || |||| ||||| || ||||| || ||||| ||||| ||||| ||||| Sbjct 33483 CT---TTCAACTTCCAAAGTGATAGTCTTGCCAGTGAGCGTCTTAACGAAGATCTGCAT 33428 Score = 113 bits (124), Expect = 5e-20 Identities = 128/169 (76%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| || ||||| || || || || | || || ||||||||||| ||||| Sbjct 32861 CTCCTTCTGGATGTTATAGTCAGAGAGGGTACGGCCATCCTCAAGCTGCTTGCCAGCGAA 32802 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| |||||||||||| | || | || ||||| ||| ||||| |||||| ||| Sbjct 32801 GATCAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTGAATCTTGCTCTTGA-CGT 32743 Query 46522 CGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569 | | | ||||||||||| || || |||| |||||||| ||||| || Sbjct 32742 TGTCGATAGTGTCGCTCGACTCGACCTCCAAAGTGATGGTCTTGCCGGT 32694 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| ||||||||| ||| || ||||| ||||| ||||| | |||||| | || ||| Sbjct 33408 ACCAAGTGCAATGTAGACTCTTTCTGGATGTTGTAATCGGACAAAGTGCGGCCATCTTCG 33349 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||||||||||||||| || | ||||||||||| | || | | ||| || || Sbjct 33348 AGCTGCTTGCCGGCGAAAATGAGACGCTGCTGGTCAGGAGGAATTCCCTCTTTATCTTGA 33289 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| ||| | | | | ||||||| ||||| || |||| ||| || || || Sbjct 33288 ATCTTTGACTTCACATTATCGATCGTGTCGGATGATTCAACCTCCAGCGTAATTGTCTTT 33229 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || || || || || ||||| Sbjct 33228 CCGGTGAGAGTCTTGACGAAAATCTGCAT 33200 Score = 102 bits (112), Expect = 9e-17 Identities = 132/180 (73%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| || || |||||||| || ||||| || |||| ||||||||||| || ||||| Sbjct 33162 TCCTTCTGAATGTTGTAGTCCGACAGAGTACGACCGTCCTCGAGCTGCTTACCAGCGAAG 33103 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||| ||||||||||||| || | || || |||||| ||| || |||| | ||| Sbjct 33102 ATCAAACGCTGCTGGTCGGGGGGAATGCCTTCTTTGTCCTGGATTTTGCTCTT-AACGTT 33044 Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | || ||||| || || || || | ||||| || || || || || || || || Sbjct 33043 GTCGATGGTATCGCTTGACTCAACCTCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTCAC 32984 >seq84 Length=124832 Score = 114 bits (126), Expect = 1e-20 Identities = 136/182 (75%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||| || ||||| | || || |||||||| |||||||| | Sbjct 44455 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCGGCGAAGA 44514 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 ||| ||||||||||||| || | | |||||||||| |||||| ||||| ||| | Sbjct 44515 TCAGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTG 44573 Query 46524 -CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||||||||| || || || | || ||||| || ||||| || || || || Sbjct 44574 TCGATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTGACG 44633 Query 46583 AA 46584 || Sbjct 44634 AA 44635 >seq121 Length=99421 Score = 93.3 bits (102), Expect = 5e-14 Identities = 80/99 (81%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || ||||| || |||| |||||||||||||| ||||| Sbjct 4822 CTCCTTCTGGATGTTGTAGTCAGAAAGAGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAA 4881 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 |||| ||||||||||| | || | | ||||||||| Sbjct 4882 GATCAGACGCTGCTGGTCAGGGGGGATTCCCTCCTTGTC 4920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565231341585480